RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SHANK2-AS3Q9BTD1 123 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 TRIOBPQ9H2D6 2365 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 KNCNA6PVL3 124 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 DEFB130BP0DP73 79 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 DEFB130AP0DP74 79 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 ATXN8Q156A1 80 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 ZNF524Q96C55 264 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM213A2RRL7 107 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 SEC11AP67812 179 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 JPT2Q9H910 190 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 COX11Q9Y6N1 276 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 TCF20Q9UGU0 1960 aaKnown RBP6.56□□□□□ -1.36
CTNND1-220ENST00000529526 SYS1-DBNDD2H3BUS1 97 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 DEFB131AP59861 70 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 SPXQ9BT56 116 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 TICRRQ7Z2Z1 1910 aa6.56□□□□□ -1.36
CTNND1-220ENST00000529526 LY6G6EA0A0G2JKS1 128 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 A0A1B0GUS0 222 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 ARMS2P0C7Q2 107 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 C1orf194Q5T5A4 169 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 ASPHD1Q5U4P2 390 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 WDR86Q86TI4 376 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 PROK2Q9HC23 129 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 U3KQA8 63 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 ESPL1Q14674 2120 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 CMC4P56277 68 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-220ENST00000529526 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-220ENST00000529526 Q6ZR03 302 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 DAZ1Q9NQZ3 744 aaKnown RBP6.55□□□□□ -1.36
CTNND1-220ENST00000529526 LY96Q9Y6Y9 160 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 G3V318 75 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 NDUFB8O95169 186 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 ARTNQ5T4W7 220 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 C1orf122Q6ZSJ8 110 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 IGHV3-16A0A0C4DH30 117 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 C9JQL5 133 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 LYPD1Q8N2G4 141 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 CYYR1Q96J86 154 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 PTPRDP23468 1912 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 MPV17L2Q567V2 206 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 RASL10AQ92737 203 aa6.55□□□□□ -1.36
CTNND1-220ENST00000529526 MYLKQ15746 1914 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 CFHR2P36980 270 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 APC2O95996 2303 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 MST1LQ2TV78 715 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 PYY3Q5JQD4 70 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 SLC25A16P16260 332 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 C17orf58Q2M2W7 97 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 MSMBP08118 114 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 SPINK13Q1W4C9 94 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 STPG4Q8N801 248 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 TPSG1Q9NRR2 321 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 MED12Q93074 2177 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 ZNF625Q96I27 306 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
CTNND1-220ENST00000529526 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 K7ENP7 123 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 PSCAO43653 123 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 FAM186AA6NE01 2351 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 TRAV26-2A0A0B4J265 109 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 ZNF833PQ6ZTB9 187 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 TMEM75Q8N9X5 138 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 TIMM21Q9BVV7 248 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 NDUFA4L2Q9NRX3 87 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 GHRHP01286 108 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 Q71RC1 249 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 Q96MF0 132 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 LIME1Q9H400 295 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 ZNF318Q5VUA4 2279 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 RLFQ13129 1914 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 UBE2E1P51965 193 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 FAM110DQ8TAY7 271 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 MRPL27Q9P0M9 148 aaKnown RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 FER1L5A0AVI2 2057 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 TRAV8-3A0A0A6YYJ7 113 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 ESDP10768 282 aa6.53□□□□□ -1.36
CTNND1-220ENST00000529526 SSBP2P81877 361 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 RNF166Q96A37 237 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 RSPO3Q9BXY4 272 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-220ENST00000529526 LINC01549A6NIU2 74 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 FNDC10F2Z333 226 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-220ENST00000529526 PAX9P55771 341 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF562Q6V9R5 426 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 ZNF664Q8N3J9 261 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 TRAV12-2A0A075B6T6 113 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV1-69DA0A0B4J2H0 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 IGHV1-69P01742 117 aa6.52□□□□□ -1.37
CTNND1-220ENST00000529526 LINC01559Q495D7 138 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms