RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 MGST2Q99735 147 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 NABP2Q9BQ15 211 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PRORYQ9H606 182 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 GNB4Q9HAV0 340 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 NGBQ9NPG2 151 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 IDI2-AS1Q9NZ38 188 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 GOLT1BQ9Y3E0 138 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 AMMECR1Q9Y4X0 333 aaPredicted RBP3.81□□□□□ -1.8
CD44-230ENST00000528922 OR51B2Q9Y5P1 312 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 RFNGQ9Y644 331 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 LINC00312Q9Y6C7 94 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 PTPRQQ9UMZ3 2332 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 INTS1Q8N201 2190 aaKnown RBP3.81□□□□□ -1.8
CD44-230ENST00000528922 COL6A6A6NMZ7 2263 aa3.81□□□□□ -1.8
CD44-230ENST00000528922 ACACAQ13085 2346 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 MED13Q9UHV7 2174 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 IGLV3-9A0A075B6K5 115 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 A0A087X0K7 114 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 SMIM27A0A1W2PRY6 76 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 COX7A2P2O60397 106 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 ZNF324O75467 553 aaPredicted RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 HSBP1O75506 76 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 LYZL6O75951 148 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 CA2P00918 260 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 LHBP01229 141 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 APCSP02743 223 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 GPX1P07203 203 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 CECR9P0C854 216 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 RD3LP0DJH9 198 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 SSTR5P35346 364 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 ATP5G3P48201 142 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 REG1BP48304 166 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 FABP6P51161 128 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 TDGF1P3P51864 188 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 EDDM3AQ14507 147 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 MIC13Q5XKP0 118 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 STUMQ69YW2 141 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 Q6AWC8 147 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 SLC25A48Q6ZT89 311 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 TGIF2LXQ8IUE1 241 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 LINC00311Q8N616 119 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 OR4C13Q8NGP0 309 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 FLYWCH2Q96CP2 140 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 STARD4Q96DR4 205 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 FMC1Q96HJ9 113 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 TXN2Q99757 166 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 RNF5Q99942 180 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 HSPB9Q9BQS6 159 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 IFI27L2Q9H2X8 130 aa3.8□□□□□ -1.8
CD44-230ENST00000528922 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 RPUSD1Q9UJJ7 312 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 MRPS16Q9Y3D3 137 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 URB1O60287 2271 aaKnown RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 COL27A1Q8IZC6 1860 aaPredicted RBP3.8□□□□□ -1.8
CD44-230ENST00000528922 PCNX2A6NKB5 2137 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CELSR3Q9NYQ7 3312 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 IGKV1D-17A0A075B6S4 117 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 SERTM2A0A1B0GWG4 89 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 DPRXA6NFQ7 191 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 DLEU1O43261 78 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 SERF1AO75920 110 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CT45A6P0DMU7 189 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CT45A5P0DMU8 189 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CT45A7P0DMV0 189 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CGB3P0DN86 165 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CGB7P0DN87 165 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 HNRNPA3P51991 378 aaKnown RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 PRRX1P54821 245 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 DSCR10P59022 87 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 KLF5Q13887 457 aaPredicted RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 PLGLAQ15195 96 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 C3AR1Q16581 482 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CENPWQ5EE01 88 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CT45A1Q5HYN5 189 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 TEX36Q5VZQ5 186 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 C10orf113Q5VZT2 155 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 LYG1Q8N1E2 194 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 ARL6IP6Q8N6S5 226 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 Q8N7P7 452 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 CT45A3Q8NHU0 189 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 RASL10AQ92737 203 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 ZFP30Q9Y2G7 519 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 SLC25A15Q9Y619 301 aa3.79□□□□□ -1.8
CD44-230ENST00000528922 V9GYV3 84 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms