RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CACNA1GO43497 2377 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 IGKV3D-11A0A0A0MRZ8 115 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 TRAV5A0A0B4J249 113 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 IGHV7-4-1A0A0J9YVY3 117 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 A0A1B0GW64 132 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 TRDV1A0A1B0GX56 115 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 A6NDX4 124 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 DPRXA6NFQ7 191 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 MAS1P04201 325 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 LINC00032P0C843 101 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 GNG2P59768 71 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 NCS1P62166 190 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 ATP5G2Q06055 141 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 SLC38A11Q08AI6 406 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
PCF11-202ENST00000528336 GLYATL3Q5SZD4 288 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 SCIMPQ6UWF3 145 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 PRR15Q8IV56 129 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 OR8I2Q8N0Y5 310 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 Q8N9W7 124 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 PLPP5Q8NEB5 264 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 ARL11Q969Q4 196 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 PPP3R2Q96LZ3 170 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 DERL3Q96Q80 235 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 OR2J1Q9GZK6 312 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 TRAPPC2LQ9UL33 140 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 MDC1Q14676 2089 aaKnown RBP3.65□□□□□ -1.83
PCF11-202ENST00000528336 ITPR1Q14643 2758 aa3.65□□□□□ -1.83
PCF11-202ENST00000528336 LOC400499M0QZD8 3231 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TRBV6-6A0A0A6YYG2 114 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 IZUMO1RA6ND01 250 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 FABP5P3A8MUU1 101 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 IGLL5B9A064 214 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 SLC22A1O15245 554 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 EDF1O60869 148 aaKnown RBP3.64□□□□□ -1.83
PCF11-202ENST00000528336 NRASP01111 189 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 CD7P09564 240 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 IGHV1-8P0DP01 117 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 COX6A1P12074 109 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 FKBP2P26885 142 aaKnown RBP3.64□□□□□ -1.83
PCF11-202ENST00000528336 S100A11P31949 105 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 RPL38P63173 70 aaKnown RBP3.64□□□□□ -1.83
PCF11-202ENST00000528336 HBA1P69905 142 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 BTG2P78543 158 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 BIKQ13323 160 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 NOXRED1Q6NXP6 359 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 SLC48A1Q6P1K1 146 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TCTE3Q8IZS6 198 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 OR11G2Q8NGC1 345 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 OR52R1Q8NGF1 315 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 OR4C16Q8NGL9 310 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 RAB2BQ8WUD1 216 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TMEM106AQ96A25 262 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TEX37Q96LM6 180 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 TP53RKQ96S44 253 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 GPX7Q96SL4 187 aaPredicted RBP3.64□□□□□ -1.83
PCF11-202ENST00000528336 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 SMIM3Q9BZL3 60 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 ZNF286AQ9HBT8 521 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 MARCOQ9UEW3 520 aaPredicted RBP3.64□□□□□ -1.83
PCF11-202ENST00000528336 SPTA1P02549 2419 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 MGAQ8IWI9 3026 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 LAMA5O15230 3695 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 ZFYVE26Q68DK2 2539 aa3.64□□□□□ -1.83
PCF11-202ENST00000528336 ARID1AO14497 2285 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 TRAV38-1A0A0B4J264 116 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 IGKV1-12A0A0C4DH73 117 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 A0A1B0GVX0 72 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 ARRDC5A6NEK1 342 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 C9JCJ5 164 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 H0YJW9 148 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 BPY2O14599 106 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 GNG7O60262 68 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 PGLYRP1O75594 196 aaPredicted RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 SCO1O75880 301 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 IGKV1D-12P01611 117 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 HLA-DQB1P01920 261 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 SRP19P09132 144 aaKnown RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 RPS25P62851 125 aaKnown RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 DEFB109BQ30KR1 87 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 RASL11AQ6T310 242 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 MORN4Q8NDC4 146 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 TSLPQ969D9 159 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 MAL2Q969L2 176 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 SLC25A21Q9BQT8 299 aaPredicted RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 PRADC1Q9BSG0 188 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 LPAR5Q9H1C0 372 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 CACYBPQ9HB71 228 aaKnown RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 KLK5Q9Y337 293 aaPredicted RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 ZFHX4Q86UP3 3567 aa3.63□□□□□ -1.83
PCF11-202ENST00000528336 TLN1Q9Y490 2541 aaKnown RBP3.63□□□□□ -1.83
PCF11-202ENST00000528336 KMT2BQ9UMN6 2715 aaPredicted RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 IGHV3-43A0A0B4J1X8 118 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms