RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 AMBPP02760 352 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 CNN1P51911 297 aaKnown RBP23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 ATP6V1FQ16864 119 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 IGFL4Q6B9Z1 124 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 Q6ZRG5 221 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 BPIFA4PQ86YQ2 179 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 GOLT1BQ9Y3E0 138 aa23.77■■□□□ 1.4
SSSCA1-205ENST00000527920 RPL29P47914 159 aaKnown RBP23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 C10orf113Q5VZT2 155 aa23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 LCN15Q6UWW0 184 aa23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 ZNF738Q8NE65 137 aa23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 DNAJC4Q9NNZ3 241 aa23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 RFNGQ9Y644 331 aa23.76■■□□□ 1.39
SSSCA1-205ENST00000527920 TRAV10A0A0B4J240 114 aa23.75■■□□□ 1.39
SSSCA1-205ENST00000527920 CYCSP99999 105 aaKnown RBP23.75■■□□□ 1.39
SSSCA1-205ENST00000527920 LGALS9CQ6DKI2 356 aa23.75■■□□□ 1.39
SSSCA1-205ENST00000527920 Q6ZTC4 211 aa23.75■■□□□ 1.39
SSSCA1-205ENST00000527920 CELA1Q9UNI1 258 aa23.75■■□□□ 1.39
SSSCA1-205ENST00000527920 RLN2P04090 185 aa23.74■■□□□ 1.39
SSSCA1-205ENST00000527920 PSG3Q16557 428 aa23.74■■□□□ 1.39
SSSCA1-205ENST00000527920 OR1L4Q8NGR5 311 aa23.74■■□□□ 1.39
SSSCA1-205ENST00000527920 LRRC20Q8TCA0 184 aa23.74■■□□□ 1.39
SSSCA1-205ENST00000527920 IGF2BP2-AS1Q96M15 143 aa23.74■■□□□ 1.39
SSSCA1-205ENST00000527920 UBE2L5PA0A1B0GUS4 154 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 OPCMLQ14982 345 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 MIC13Q5XKP0 118 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 C1orf158Q8N1D5 194 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 OR11H7Q8NGC8 314 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 PFDN5Q99471 154 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 SLC50A1Q9BRV3 221 aa23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 ZNF331Q9NQX6 463 aaPredicted RBP23.73■■□□□ 1.39
SSSCA1-205ENST00000527920 IGHV3OR16-12A0A075B7B8 117 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 E5RGE8 158 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 MPDU1O75352 247 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 SIX6O95475 246 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 BAXQ07812 192 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 C12orf74Q32Q52 190 aa23.72■■□□□ 1.39
SSSCA1-205ENST00000527920 MORN5Q5VZ52 161 aa23.71■■□□□ 1.39
SSSCA1-205ENST00000527920 OR8A1Q8NGG7 326 aa23.71■■□□□ 1.39
SSSCA1-205ENST00000527920 SLC39A9Q9NUM3 307 aa23.71■■□□□ 1.39
SSSCA1-205ENST00000527920 TEX48A0A1B0GUV7 120 aa23.7■■□□□ 1.38
SSSCA1-205ENST00000527920 B2MP61769 119 aa23.7■■□□□ 1.38
SSSCA1-205ENST00000527920 SLC25A31Q9H0C2 315 aa23.7■■□□□ 1.38
SSSCA1-205ENST00000527920 HBE1P02100 147 aa23.69■■□□□ 1.38
SSSCA1-205ENST00000527920 SPART-AS1P0CW21 52 aa23.69■■□□□ 1.38
SSSCA1-205ENST00000527920 IGLC2P0DOY2 106 aa23.69■■□□□ 1.38
SSSCA1-205ENST00000527920 IGLL5B9A064 214 aa23.68■■□□□ 1.38
SSSCA1-205ENST00000527920 FGF7P21781 194 aa23.68■■□□□ 1.38
SSSCA1-205ENST00000527920 CRXO43186 299 aaPredicted RBP23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 INSP01308 110 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 H2BFSP57053 126 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 GUK1Q16774 197 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 RPUSD4Q96CM3 377 aaKnown RBP23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 OR5AC2Q9NZP5 309 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 APLNQ9ULZ1 77 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 PXMP4Q9Y6I8 212 aa23.67■■□□□ 1.38
SSSCA1-205ENST00000527920 BOLA2-SMG1P6H3BVE0 249 aa23.66■■□□□ 1.38
SSSCA1-205ENST00000527920 HIST1H1AQ02539 215 aaPredicted RBP23.66■■□□□ 1.38
SSSCA1-205ENST00000527920 SPINK13Q1W4C9 94 aa23.66■■□□□ 1.38
SSSCA1-205ENST00000527920 RRN3P1Q2M238 152 aa23.66■■□□□ 1.38
SSSCA1-205ENST00000527920 RNF126Q9BV68 326 aa23.66■■□□□ 1.38
SSSCA1-205ENST00000527920 H0YIZ8 118 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 M0R2Z0 102 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 NHLH2Q02577 135 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 LRRC37A5PQ49AS3 106 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 OR5C1Q8NGR4 320 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 SAT2Q96F10 170 aaPredicted RBP23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 NPCDR1Q9BY65 106 aa23.65■■□□□ 1.38
SSSCA1-205ENST00000527920 TMEM208Q9BTX3 173 aa23.64■■□□□ 1.37
SSSCA1-205ENST00000527920 DKK2Q9UBU2 259 aa23.64■■□□□ 1.37
SSSCA1-205ENST00000527920 DEFB131BA0A096LNP1 70 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 LOC102723971A0A1B0GUV8 181 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 H3BQ15 152 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 SSNA1O43805 119 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 ZNF253O75346 499 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 EMP1P54849 157 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 PPP1R1CQ8WVI7 109 aa23.63■■□□□ 1.37
SSSCA1-205ENST00000527920 SLC17A3O00476 420 aa23.62■■□□□ 1.37
SSSCA1-205ENST00000527920 ZNF767PQ75MW2 155 aa23.62■■□□□ 1.37
SSSCA1-205ENST00000527920 IGHV4-4A0A075B6R2 117 aa23.61■■□□□ 1.37
SSSCA1-205ENST00000527920 TRAV5A0A0B4J249 113 aa23.61■■□□□ 1.37
SSSCA1-205ENST00000527920 PET100P0DJ07 73 aa23.61■■□□□ 1.37
SSSCA1-205ENST00000527920 RHOBP62745 196 aa23.61■■□□□ 1.37
SSSCA1-205ENST00000527920 TMEM14CQ9P0S9 112 aa23.61■■□□□ 1.37
SSSCA1-205ENST00000527920 SNRPCP09234 159 aaKnown RBP23.6■■□□□ 1.37
SSSCA1-205ENST00000527920 OXA1LQ15070 435 aa23.6■■□□□ 1.37
SSSCA1-205ENST00000527920 FAM222AQ5U5X8 452 aa23.6■■□□□ 1.37
SSSCA1-205ENST00000527920 BAP18Q8IXM2 172 aa23.6■■□□□ 1.37
SSSCA1-205ENST00000527920 PPP1R14DQ9NXH3 145 aa23.6■■□□□ 1.37
SSSCA1-205ENST00000527920 TMEM256Q8N2U0 113 aa23.59■■□□□ 1.37
SSSCA1-205ENST00000527920 THAP6Q8TBB0 222 aa23.59■■□□□ 1.37
SSSCA1-205ENST00000527920 KCNIP2Q9NS61 270 aa23.59■■□□□ 1.37
SSSCA1-205ENST00000527920 YTHDF2Q9Y5A9 579 aaKnown RBP23.59■■□□□ 1.37
SSSCA1-205ENST00000527920 EPPK1P58107 5090 aaKnown RBP23.59■■□□□ 1.37
SSSCA1-205ENST00000527920 TSPOP30536 169 aa23.58■■□□□ 1.37
SSSCA1-205ENST00000527920 NIPSNAP3BQ9BS92 247 aa23.58■■□□□ 1.37
SSSCA1-205ENST00000527920 H3BTX0 84 aa23.57■■□□□ 1.36
SSSCA1-205ENST00000527920 MPC2O95563 127 aa23.57■■□□□ 1.36
SSSCA1-205ENST00000527920 CLINT1Q14677 625 aa23.57■■□□□ 1.36
SSSCA1-205ENST00000527920 OR10J6PQ8NGY7 276 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms