RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 UQCC1Q9NVA1 299 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 MED9Q9NWA0 146 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 IGKV1D-37A0A075B6S9 117 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 DEFB4AO15263 64 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 RBMY1A1P0DJD3 496 aaKnown RBP10.29□□□□□ -0.76
CAPN1-212ENST00000527887 RBMY1CP0DJD4 496 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 SERF2P84101 59 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 ARL16Q0P5N6 197 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 RBMY1FQ15415 496 aaKnown RBP10.29□□□□□ -0.76
CAPN1-212ENST00000527887 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 SCGB1C1Q8TD33 95 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 CLUHP3Q96NS8 147 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 SMIM3Q9BZL3 60 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 X6R8D5 127 aa10.29□□□□□ -0.76
CAPN1-212ENST00000527887 HLA-DRB4P13762 266 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 SULT1A2P50226 295 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 ZNF90Q03938 601 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 CLINT1Q14677 625 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 WDR61Q9GZS3 305 aaKnown RBP10.28□□□□□ -0.76
CAPN1-212ENST00000527887 NPVFQ9HCQ7 196 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 WDR83OSQ9Y284 106 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 HLA-DRB4X5D2U9 266 aa10.28□□□□□ -0.76
CAPN1-212ENST00000527887 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 LINC00862A6NCI5 91 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 PSMB3P49720 205 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 MEOX2P50222 304 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 LYZP61626 148 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 OR2G3Q8NGZ4 309 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 TMED6Q8WW62 240 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 NEU1Q99519 415 aa10.27□□□□□ -0.77
CAPN1-212ENST00000527887 SMIM9A6NGZ8 99 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 ISLRO14498 428 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 NMBP08949 121 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 BLOC1S1P78537 153 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 SAV1Q9H4B6 383 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-212ENST00000527887 KCNIP2Q9NS61 270 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 CLEC5AQ9NY25 188 aa10.26□□□□□ -0.77
CAPN1-212ENST00000527887 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-212ENST00000527887 TMEM189A5PLL7 270 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 IGLL5B9A064 214 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 MBP02144 154 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 RAB31Q13636 194 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
CAPN1-212ENST00000527887 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 IGKV1OR2-108A0A075B7D4 117 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 SOCS3O14543 225 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 GALR1P47211 349 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF705AQ6ZN79 300 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 LINC00052Q96N35 136 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 GPR82Q96P67 336 aa10.24□□□□□ -0.77
CAPN1-212ENST00000527887 Q6ZTC4 211 aa10.23□□□□□ -0.77
CAPN1-212ENST00000527887 S100A7AQ86SG5 101 aa10.23□□□□□ -0.77
CAPN1-212ENST00000527887 RPP25LQ8N5L8 163 aaKnown RBP10.23□□□□□ -0.77
CAPN1-212ENST00000527887 OR1B1Q8NGR6 318 aa10.23□□□□□ -0.77
CAPN1-212ENST00000527887 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
CAPN1-212ENST00000527887 RPRMQ9NS64 109 aa10.23□□□□□ -0.77
CAPN1-212ENST00000527887 DNAH10Q8IVF4 4471 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 UBE2L5PA0A1B0GUS4 154 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF98A6NK75 572 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF705FA8MVS1 300 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF705DP0CH99 300 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-212ENST00000527887 ZNF705BP0CI00 300 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-212ENST00000527887 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 EIF4E3Q8N5X7 224 aaKnown RBP10.22□□□□□ -0.77
CAPN1-212ENST00000527887 NPCDR1Q9BY65 106 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 FRAS1Q86XX4 4008 aa10.22□□□□□ -0.77
CAPN1-212ENST00000527887 AGRNO00468 2067 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 FGF7P21781 194 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 RPL29P47914 159 aaKnown RBP10.21□□□□□ -0.77
CAPN1-212ENST00000527887 SELENOTP62341 195 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 PSG9Q00887 426 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 AKR1C1Q04828 323 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 C12orf74Q32Q52 190 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 GDF5OSQ5U4N7 250 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 RNF24Q9Y225 148 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 RFNGQ9Y644 331 aa10.21□□□□□ -0.77
CAPN1-212ENST00000527887 IGHV4-4A0A075B6R2 117 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms