RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SLC25A6P12236 298 aa13.14□□□□□ -0.31
CAPN1-206ENST00000526966 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
CAPN1-206ENST00000526966 C6orf223Q8N319 242 aa13.14□□□□□ -0.31
CAPN1-206ENST00000526966 DNAH5Q8TE73 4624 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 OR4E1P0C645 316 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-206ENST00000526966 BAP18Q8IXM2 172 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 HYLS1Q96M11 299 aa13.13□□□□□ -0.31
CAPN1-206ENST00000526966 PRAF2O60831 178 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 MED6O75586 246 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 SFT2D2O95562 160 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 ORM2P19652 201 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 AZU1P20160 251 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-206ENST00000526966 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-206ENST00000526966 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-206ENST00000526966 TMEM147Q9BVK8 224 aa13.12□□□□□ -0.31
CAPN1-206ENST00000526966 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 F5H768 121 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 H3BRN7 92 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 ATP5G1P05496 136 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 VAMP1P23763 118 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 S100A7P31151 101 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 ATP5G3P48201 142 aa13.11□□□□□ -0.31
CAPN1-206ENST00000526966 SYNGR2O43760 224 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 NUDT3O95989 172 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 IL5P05113 134 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
CAPN1-206ENST00000526966 FCN2Q15485 313 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 MAPKAPK5-AS1Q8N8E1 139 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 MED28Q9H204 178 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
CAPN1-206ENST00000526966 TRAV12-2A0A075B6T6 113 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 CBY3A6NI87 242 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 CCL18P55774 89 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 SHANK2-AS3Q9BTD1 123 aa13.09□□□□□ -0.31
CAPN1-206ENST00000526966 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-206ENST00000526966 WRBO00258 174 aa13.08□□□□□ -0.32
CAPN1-206ENST00000526966 TAS2R60P59551 318 aa13.08□□□□□ -0.32
CAPN1-206ENST00000526966 AKR1C1Q04828 323 aa13.08□□□□□ -0.32
CAPN1-206ENST00000526966 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
CAPN1-206ENST00000526966 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
CAPN1-206ENST00000526966 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
CAPN1-206ENST00000526966 CXCL3P19876 107 aa13.07□□□□□ -0.32
CAPN1-206ENST00000526966 FGL1Q08830 312 aa13.07□□□□□ -0.32
CAPN1-206ENST00000526966 OR8A1Q8NGG7 326 aa13.07□□□□□ -0.32
CAPN1-206ENST00000526966 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-206ENST00000526966 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
CAPN1-206ENST00000526966 C16orf74Q96GX8 76 aa13.07□□□□□ -0.32
CAPN1-206ENST00000526966 A0A087X0K7 114 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 PLP1P60201 277 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 HIST1H1AQ02539 215 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-206ENST00000526966 SPANXN5Q5MJ07 72 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 CYP2G1PQ6ZSU1 146 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 LINC01587Q99440 93 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 SEC22CQ9BRL7 303 aa13.06□□□□□ -0.32
CAPN1-206ENST00000526966 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-206ENST00000526966 TIMM8BQ9Y5J9 83 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-206ENST00000526966 H3BP45 60 aa13.05□□□□□ -0.32
CAPN1-206ENST00000526966 RAP2BP61225 183 aa13.05□□□□□ -0.32
CAPN1-206ENST00000526966 SSX7Q7RTT5 188 aa13.05□□□□□ -0.32
CAPN1-206ENST00000526966 Q8N1X5 172 aa13.05□□□□□ -0.32
CAPN1-206ENST00000526966 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
CAPN1-206ENST00000526966 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
CAPN1-206ENST00000526966 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
CAPN1-206ENST00000526966 RHOBP62745 196 aa13.04□□□□□ -0.32
CAPN1-206ENST00000526966 PSG3Q16557 428 aa13.04□□□□□ -0.32
CAPN1-206ENST00000526966 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
CAPN1-206ENST00000526966 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
CAPN1-206ENST00000526966 ASB13Q8WXK3 278 aa13.04□□□□□ -0.32
CAPN1-206ENST00000526966 HYPMO75409 117 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 HOXB5P09067 269 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 LINC00869P0C866 280 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 CLINT1Q14677 625 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-206ENST00000526966 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 UHRF2Q96PU4 802 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 KRTAP1-5Q9BYS1 174 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 Q9H8V8 135 aa13.03□□□□□ -0.32
CAPN1-206ENST00000526966 PMS2P5A8MQ11 134 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.33
CAPN1-206ENST00000526966 CDKN1BP46527 198 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 SELENOTP62341 195 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 ID3Q02535 119 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 TTC32Q5I0X7 151 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 ZNF503Q96F45 646 aa13.02□□□□□ -0.33
CAPN1-206ENST00000526966 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms