RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TMEM37Q8WXS4 190 aa7.49□□□□□ -1.21
VPS28-204ENST00000526054 RSG1Q9BU20 258 aa7.49□□□□□ -1.21
VPS28-204ENST00000526054 WFDC1Q9HC57 220 aa7.49□□□□□ -1.21
VPS28-204ENST00000526054 ISLRO14498 428 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 PSMB3P49720 205 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 FFAR4Q5NUL3 377 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 EIF5AL1Q6IS14 154 aaKnown RBP7.48□□□□□ -1.21
VPS28-204ENST00000526054 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 APRG1Q8IVJ8 170 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 LINC00476Q8WZB0 136 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 PHYHIPLQ96FC7 376 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 C16orf92Q96LL3 132 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 TIMM9Q9Y5J7 89 aa7.48□□□□□ -1.21
VPS28-204ENST00000526054 A0A087X0K7 114 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 CXorf65A6NEN9 183 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 SOCS3O14543 225 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 IFNA7P01567 189 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 APOC4P55056 127 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 PMS2P11Q13670 270 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 FAM78BQ5VT40 261 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 HSD17B11Q8NBQ5 300 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 GNPNAT1Q96EK6 184 aaPredicted RBP7.47□□□□□ -1.21
VPS28-204ENST00000526054 LINC00052Q96N35 136 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
VPS28-204ENST00000526054 MRPL32Q9BYC8 188 aaKnown RBP7.47□□□□□ -1.21
VPS28-204ENST00000526054 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 ZNF124Q15973 351 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 ACOT6Q3I5F7 207 aaPredicted RBP7.46□□□□□ -1.22
VPS28-204ENST00000526054 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 ZNF767PQ75MW2 155 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 STHQ8IWL8 128 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 ZNF680Q8NEM1 530 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 LRRC20Q8TCA0 184 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 PSMG3Q9BT73 122 aaPredicted RBP7.46□□□□□ -1.22
VPS28-204ENST00000526054 FUT9Q9Y231 359 aa7.46□□□□□ -1.22
VPS28-204ENST00000526054 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 AGRNO00468 2067 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 A0A0J9YWU9 116 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 RGS13O14921 159 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 MRPS12O15235 138 aaKnown RBP7.45□□□□□ -1.22
VPS28-204ENST00000526054 LY6G6CO95867 125 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 SEC11BP0C7V7 166 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
VPS28-204ENST00000526054 ATP6V0CP27449 155 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 RHOBP62745 196 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 IFITM2Q01629 132 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 DEFB135Q30KP9 77 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 ACTL10Q5JWF8 245 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 ALKAL2Q6UX46 152 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 OR2G3Q8NGZ4 309 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 TMED6Q8WW62 240 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 TMEM14CQ9P0S9 112 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 TP53TG1Q9Y2A0 90 aa7.45□□□□□ -1.22
VPS28-204ENST00000526054 KNCNA6PVL3 124 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 UBE2CO00762 179 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 SPRY2O43597 315 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 MBP02144 154 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 IGLC2P0DOY2 106 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 SPP1P10451 314 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 M6PRP20645 277 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 TAS2R45P59539 299 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 SERF2P84101 59 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 GUK1Q16774 197 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 KHDC3LQ587J8 217 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 SPATA31B1PQ5VZV4 182 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 EBLN2Q6P2I7 272 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 FOXI2Q6ZQN5 318 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 Q6ZWC4 215 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 MIR17HGQ75NE6 70 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 C17orf77Q96MU5 243 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 SH3BGRL3Q9H299 93 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 HRH4Q9H3N8 390 aa7.44□□□□□ -1.22
VPS28-204ENST00000526054 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 A0A1W2PPV4 95 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 HIST1H1EP10412 219 aaKnown RBP7.43□□□□□ -1.22
VPS28-204ENST00000526054 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 RAB2AP61019 212 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 RAB14P61106 215 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
VPS28-204ENST00000526054 TRPT1Q86TN4 253 aaKnown RBP7.43□□□□□ -1.22
VPS28-204ENST00000526054 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 C20orf173Q96LM9 149 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 SLC25A2Q9BXI2 301 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 CSTL1Q9H114 145 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
VPS28-204ENST00000526054 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms