RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FHITP49789 147 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 MFAP2P55001 183 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TPPP2P59282 170 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 RHOGP84095 191 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 ATP5G2Q06055 141 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 ATP6V1FQ16864 119 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 KLK9Q2XQG4 91 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 BSXQ3C1V8 233 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 PVRIGQ6DKI7 326 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 OR8G2PQ6IF36 304 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 C10orf99Q6UWK7 81 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TMEM14EPQ6UXP3 125 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 FAM223AQ8IWN6 122 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 TMEM252Q8N6L7 170 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 STXBP6Q8NFX7 210 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 OR10P1Q8NGE3 313 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 OR4X2Q8NGF9 303 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 RNASEH2CQ8TDP1 164 aaKnown RBP3.39□□□□□ -1.87
USP48-211ENST00000526044 DCUN1D4Q92564 292 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 USMG5Q96IX5 58 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 OR4C12Q96R67 309 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 C19orf24Q9BVV8 132 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 C11orf1Q9H5F2 150 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 KLK9Q9UKQ9 250 aa3.39□□□□□ -1.87
USP48-211ENST00000526044 F8P00451 2351 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 MXRA5Q9NR99 2828 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 FXYD6-FXYD2A0A087WZ82 144 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 TRBV7-1A0A0A6YYK4 115 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 IGSF23A1L1A6 192 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 HMSDA8MTL9 139 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 I3L2K1 104 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 CST7O76096 145 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 MT-CO2P00403 227 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 IGHV3-48P01763 117 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 CD28P10747 220 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 OPRK1P41145 380 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 SULT1A1P50225 295 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 AP2S1P53680 142 aaPredicted RBP3.38□□□□□ -1.87
USP48-211ENST00000526044 HBG1P69891 147 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 HBG2P69892 147 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
USP48-211ENST00000526044 PSG3Q16557 428 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 C15orf32Q32M92 178 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 CLEC19AQ6UXS0 136 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 C12orf54Q6X4T0 127 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 ACOT7LQ6ZUV0 252 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 COX8CQ7Z4L0 72 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 STX12Q86Y82 276 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 ZNF491Q8N8L2 437 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 OR1S2Q8NGQ3 325 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 VN1R17PQ8TDU5 208 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 EEF1AKMT3Q96AZ1 226 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 UBE2E2Q96LR5 201 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 HYLS1Q96M11 299 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 AQP10Q96PS8 301 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 GGACTQ9BVM4 153 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 NPVFQ9HCQ7 196 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 LYRM2Q9NU23 88 aaPredicted RBP3.38□□□□□ -1.87
USP48-211ENST00000526044 NAGKQ9UJ70 344 aa3.38□□□□□ -1.87
USP48-211ENST00000526044 FN1P02751 2386 aaKnown RBP3.38□□□□□ -1.87
USP48-211ENST00000526044 SONP18583 2426 aaKnown RBP3.37□□□□□ -1.87
USP48-211ENST00000526044 TRAV30A0A087WSZ9 112 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
USP48-211ENST00000526044 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 A0A0D9SG52 128 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 FAM74A7A6NL05 159 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 G3V3Q6 166 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 H3BTX0 84 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 K7EIM0 57 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 TAAR5O14804 337 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 ARPC5O15511 151 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 IGHV3-11P01762 117 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 IGHV3-23P01764 117 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 C1QBP02746 253 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 HSPB1P04792 205 aaKnown RBP3.37□□□□□ -1.87
USP48-211ENST00000526044 RIPPLY3P57055 190 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 KRTAP10-3P60369 221 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 BAXQ07812 192 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 CD300CQ08708 224 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 SLC38A11Q08AI6 406 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 OR2F1Q13607 317 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 Q56UQ5 140 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 TCTEX1D4Q5JR98 221 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 ZNF343Q6P1L6 599 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 C3orf56Q8N813 242 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 UBAC2Q8NBM4 344 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 OR5C1Q8NGR4 320 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 OR4X1Q8NH49 305 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 ZNF502Q8TBZ5 544 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 SCGB1C1Q8TD33 95 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 PPP1R14BQ96C90 147 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 ACY3Q96HD9 319 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 SLC35E1Q96K37 410 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 OR5B12Q96R08 314 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 FNDC4Q9H6D8 234 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms