RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF471Q9BX82 626 aaPredicted RBP15.37■□□□□ 0.05
CD44-222ENST00000526025 A0A1W2PPV4 95 aa15.36■□□□□ 0.05
CD44-222ENST00000526025 TMEM41BQ5BJD5 291 aa15.36■□□□□ 0.05
CD44-222ENST00000526025 APRG1Q8IVJ8 170 aa15.36■□□□□ 0.05
CD44-222ENST00000526025 OR51M1Q9H341 326 aa15.36■□□□□ 0.05
CD44-222ENST00000526025 LOC102724200A0A096LPH7 203 aaPredicted RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 TRAV8-2A0A0B4J237 113 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 RBMY1BA6NDE4 496 aaKnown RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 RBMY1EA6NEQ0 496 aaKnown RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 H3BQ15 152 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 RBMY1DP0C7P1 496 aaKnown RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 SEC11BP0C7V7 166 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 C4BPBP20851 252 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 PQLC2Q6ZP29 291 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 BAP18Q8IXM2 172 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 RPP25LQ8N5L8 163 aaKnown RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 SAT2Q96F10 170 aaPredicted RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 PAXXQ9BUH6 204 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 ZNF331Q9NQX6 463 aaPredicted RBP15.35■□□□□ 0.05
CD44-222ENST00000526025 AGRNO00468 2067 aa15.35■□□□□ 0.05
CD44-222ENST00000526025 TRBV19A0A075B6N1 114 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 KIR2DL5BA0A0G2JN68 375 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 KIR2DL5BA0A0G2JPC4 375 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 TPT1P13693 172 aaKnown RBP15.34■□□□□ 0.05
CD44-222ENST00000526025 CDC34P49427 236 aaPredicted RBP15.34■□□□□ 0.05
CD44-222ENST00000526025 KIR2DL5AQ8N109 375 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 C9orf62Q8N4C0 152 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 KIR2DL5BQ8NHK3 375 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 LRRC20Q8TCA0 184 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 RPRMQ9NS64 109 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 ZNF586Q9NXT0 402 aa15.34■□□□□ 0.05
CD44-222ENST00000526025 PYYP10082 97 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 AKR1C8PQ5T2L2 129 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 FAM122CQ6P4D5 195 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 FOXI2Q6ZQN5 318 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 FXYD5Q96DB9 178 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 LINC00052Q96N35 136 aa15.33■□□□□ 0.04
CD44-222ENST00000526025 ACTR3CQ9C0K3 210 aaPredicted RBP15.33■□□□□ 0.04
CD44-222ENST00000526025 UMAD1C9J7I0 102 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 OR7C2O60412 319 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 STAG3L2P0CL84 134 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 STAG3L3P0CL85 134 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 PSG9Q00887 426 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 ZNF124Q15973 351 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 SLC51BQ86UW2 128 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 RNF141Q8WVD5 230 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 ZNF503Q96F45 646 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 C20orf173Q96LM9 149 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 CLUHP3Q96NS8 147 aa15.32■□□□□ 0.04
CD44-222ENST00000526025 SAV1Q9H4B6 383 aaPredicted RBP15.32■□□□□ 0.04
CD44-222ENST00000526025 DNAH9Q9NYC9 4486 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 SLC17A3O00476 420 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 NBEAP1P0C6P0 100 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 NHLRC4P0CG21 123 aaPredicted RBP15.31■□□□□ 0.04
CD44-222ENST00000526025 HLA-DRB4P13762 266 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 APOC4P55056 127 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 PSG3Q16557 428 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 HAGHQ16775 308 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 TRPT1Q86TN4 253 aaKnown RBP15.31■□□□□ 0.04
CD44-222ENST00000526025 STHQ8IWL8 128 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 RAB24Q969Q5 203 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 MRPL53Q96EL3 112 aaKnown RBP15.31■□□□□ 0.04
CD44-222ENST00000526025 HLA-DRB4X5D2U9 266 aa15.31■□□□□ 0.04
CD44-222ENST00000526025 UBE2CO00762 179 aa15.3■□□□□ 0.04
CD44-222ENST00000526025 NDUFB4O95168 129 aa15.3■□□□□ 0.04
CD44-222ENST00000526025 UBE2L3P68036 154 aaKnown RBP15.3■□□□□ 0.04
CD44-222ENST00000526025 ACTL10Q5JWF8 245 aa15.3■□□□□ 0.04
CD44-222ENST00000526025 EIF5AL1Q6IS14 154 aaKnown RBP15.3■□□□□ 0.04
CD44-222ENST00000526025 PRELID1Q9Y255 219 aa15.3■□□□□ 0.04
CD44-222ENST00000526025 CTXND1A0A1B0GTU2 59 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 KNCNA6PVL3 124 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 H3BMM0 161 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 EBLN2Q6P2I7 272 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 SBSPONQ8IVN8 264 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 LYPD1Q8N2G4 141 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 RNF182Q8N6D2 247 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 TM2D3Q9BRN9 247 aa15.29■□□□□ 0.04
CD44-222ENST00000526025 OR10J4P0C629 311 aa15.28■□□□□ 0.04
CD44-222ENST00000526025 IGFL4Q6B9Z1 124 aa15.28■□□□□ 0.04
CD44-222ENST00000526025 MORN3Q6PF18 240 aaPredicted RBP15.28■□□□□ 0.04
CD44-222ENST00000526025 DPPA3Q6W0C5 159 aa15.28■□□□□ 0.04
CD44-222ENST00000526025 ZNF738Q8NE65 137 aa15.28■□□□□ 0.04
CD44-222ENST00000526025 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
CD44-222ENST00000526025 A0A0J9YX75 114 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 A8MTW9 85 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 H3BTX0 84 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 CXorf1O96002 111 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 SNRPCP09234 159 aaKnown RBP15.27■□□□□ 0.04
CD44-222ENST00000526025 ARL14EPLP0DKL9 152 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 BLNKQ8WV28 456 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 AAMDCQ9H7C9 122 aa15.27■□□□□ 0.04
CD44-222ENST00000526025 DUSP14O95147 198 aaKnown RBP15.26■□□□□ 0.03
CD44-222ENST00000526025 RPL35AP18077 110 aaKnown RBP15.26■□□□□ 0.03
CD44-222ENST00000526025 ZNF726P1Q15940 193 aa15.26■□□□□ 0.03
CD44-222ENST00000526025 GDF5OSQ5U4N7 250 aa15.26■□□□□ 0.03
CD44-222ENST00000526025 CSTL1Q9H114 145 aa15.26■□□□□ 0.03
CD44-222ENST00000526025 HLA-DMBP28068 263 aa15.25■□□□□ 0.03
CD44-222ENST00000526025 RAB5CP51148 216 aa15.25■□□□□ 0.03
CD44-222ENST00000526025 Q6ZWC4 215 aa15.25■□□□□ 0.03
CD44-222ENST00000526025 OR8A1Q8NGG7 326 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms