RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 TRGV1A0A0A0MS02 117 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 TRAV12-3A0A0B4J271 114 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 IGHV3-38A0A0C4DH36 116 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 PRAC2D3DTV9 90 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 E5RGE8 158 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 CCNKO75909 580 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 PGAM2P15259 253 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 MXD1Q05195 221 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 MEF2DQ14814 521 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 TRIM16LQ309B1 348 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 ACOT6Q3I5F7 207 aaPredicted RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 MORN5Q5VZ52 161 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 IQCF2Q8IXL9 164 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 SELENOHQ8IZQ5 122 aaKnown RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 RPUSD4Q96CM3 377 aaKnown RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 S100A16Q96FQ6 103 aaKnown RBP4.55□□□□□ -1.68
SSH3-204ENST00000525913 Q9HAA7 133 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 CACNG5Q9UF02 275 aa4.55□□□□□ -1.68
SSH3-204ENST00000525913 LINC00854A0A1B0GVQ3 168 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 H3BRN7 92 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 GABARAPH6UMI1 98 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 LECT2O14960 151 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 GABARAPO95166 117 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 CFDP00746 253 aaPredicted RBP4.54□□□□□ -1.68
SSH3-204ENST00000525913 FABP1P07148 127 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 CT45A10P0DMU9 189 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 GYPEP15421 78 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 ORM2P19652 201 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 SRIP30626 198 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 PRSS3P35030 304 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 TDRG1Q3Y452 100 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 ANXA2RQ3ZCQ2 193 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 TEPPQ6URK8 271 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 LGI3Q8N145 548 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 BLNKQ8WV28 456 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 VGLL1Q99990 258 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 PAXXQ9BUH6 204 aa4.54□□□□□ -1.68
SSH3-204ENST00000525913 TEX13DA0A0J9YY54 714 aaPredicted RBP4.53□□□□□ -1.68
SSH3-204ENST00000525913 RNF222A6NCQ9 220 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 J3KRW8 73 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 RCVRNP35243 200 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 TCL1AP56279 114 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 RNASE11Q8TAA1 199 aaKnown RBP4.53□□□□□ -1.68
SSH3-204ENST00000525913 SLC35E1Q96K37 410 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 SHANK2-AS3Q9BTD1 123 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 TMEM222Q9H0R3 208 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 TMEM56-RWDD3S4R434 201 aa4.53□□□□□ -1.68
SSH3-204ENST00000525913 PRSS46E5RG02 174 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 SFTA3P0C7M3 94 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 RPL7P18124 248 aaKnown RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 ATP5IP56385 69 aaPredicted RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 TIRAPP58753 221 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 C4orf46Q504U0 113 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 STEAP1BQ6NZ63 245 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 CCDC190Q86UF4 302 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 ZNF680Q8NEM1 530 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 DTD1Q8TEA8 209 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 BAALCQ8WXS3 180 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 ZNF479Q96JC4 524 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 ODF3Q96PU9 254 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 RTBDNQ9BSG5 229 aaPredicted RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 TMEM147Q9BVK8 224 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 RBKSQ9H477 322 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 ZNF331Q9NQX6 463 aaPredicted RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 MRPL16Q9NX20 251 aaKnown RBP4.52□□□□□ -1.69
SSH3-204ENST00000525913 COPZ2Q9P299 210 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 HSPB7Q9UBY9 170 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 TP53TG3Q9ULZ0 132 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 SSR3Q9UNL2 185 aa4.52□□□□□ -1.69
SSH3-204ENST00000525913 LOC100131303A0A0U1RQF7 123 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 RBFOX3A6NFN3 312 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 PMS2P5A8MQ11 134 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 TMEM127O75204 238 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 B3GALNT1O75752 331 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 IGHV3-30P01768 117 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 IGHV3-30-3P0DP02 117 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 IGHV3-30-5P0DP03 117 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 TNFSF8P32971 234 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 PLP1P60201 277 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 CD300CQ08708 224 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 UBE2NLQ5JXB2 153 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 IBA57Q5T440 356 aaKnown RBP4.51□□□□□ -1.69
SSH3-204ENST00000525913 GPR107Q5VW38 600 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 PATE2Q6UY27 113 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 Q6ZQT7 251 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 C9orf47Q6ZRZ4 202 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 ACOT7LQ6ZUV0 252 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 BPIFCQ8NFQ6 507 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 OR13C8Q8NGS7 320 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 OR1S1Q8NH92 325 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
SSH3-204ENST00000525913 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms