RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 STOML3Q8TAV4 291 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 PCNPQ8WW12 178 aaKnown RBP4.81□□□□□ -1.64
CD44-214ENST00000525211 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 PPP1R14BQ96C90 147 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 FXYD5Q96DB9 178 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 SAT2Q96F10 170 aaPredicted RBP4.81□□□□□ -1.64
CD44-214ENST00000525211 PSMG3Q9BT73 122 aaPredicted RBP4.81□□□□□ -1.64
CD44-214ENST00000525211 MCRIP2Q9BUT9 160 aaKnown RBP4.81□□□□□ -1.64
CD44-214ENST00000525211 TMPRSS5Q9H3S3 457 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
CD44-214ENST00000525211 A0A1B0GV50 99 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 KANTRA0A1W2PQU2 76 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 RBMY1BA6NDE4 496 aaKnown RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 RBMY1EA6NEQ0 496 aaKnown RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 ZNF705FA8MVS1 300 aaPredicted RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 PRAC2D3DTV9 90 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 C17orf112F2Z3M2 114 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 JTBO76095 146 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 RBMY1DP0C7P1 496 aaKnown RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
CD44-214ENST00000525211 INSL3P51460 131 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 DEFB131AP59861 70 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 DEFA6Q01524 100 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 IFITM2Q01629 132 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 RAB31Q13636 194 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 TMEM41BQ5BJD5 291 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 LCN12Q6JVE5 192 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 ALKAL2Q6UX46 152 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 Q6ZRG5 221 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 OR1L4Q8NGR5 311 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 PHYHIPLQ96FC7 376 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 ASCL2Q99929 193 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 MAP6D1Q9H9H5 199 aa4.8□□□□□ -1.64
CD44-214ENST00000525211 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 A0A087X0K7 114 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 A0A1W2PS18 150 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 M0R3E3 92 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 SCGB2A1O75556 95 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 SEC11BP0C7V7 166 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 ARL14EPLP0DKL9 152 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
CD44-214ENST00000525211 CD81P60033 236 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 ACOT6Q3I5F7 207 aaPredicted RBP4.79□□□□□ -1.64
CD44-214ENST00000525211 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 LCN15Q6UWW0 184 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 RBPMS2Q6ZRY4 209 aaKnown RBP4.79□□□□□ -1.64
CD44-214ENST00000525211 SLC51BQ86UW2 128 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 EXOC3-AS1Q8N2X6 119 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 OR2K2Q8NGT1 345 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 BLNKQ8WV28 456 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 GNPNAT1Q96EK6 184 aaPredicted RBP4.79□□□□□ -1.64
CD44-214ENST00000525211 SPAG8Q99932 426 aaPredicted RBP4.79□□□□□ -1.64
CD44-214ENST00000525211 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 OR51M1Q9H341 326 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 NRN1Q9NPD7 142 aa4.79□□□□□ -1.64
CD44-214ENST00000525211 TRBV19A0A075B6N1 114 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 DNASE2O00115 360 aaPredicted RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 OR7C2O60412 319 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 GIG44P09565 113 aaPredicted RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 STAG3L2P0CL84 134 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 STAG3L3P0CL85 134 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 IGHV4-30-4P0DP06 118 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 HIST1H1EP10412 219 aaKnown RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 TPT1P13693 172 aaKnown RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 GCHFRP30047 84 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 SULT1A2P50226 295 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 SERF2P84101 59 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 SRSF3P84103 164 aaKnown RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 PSMG4Q5JS54 123 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 AKR1C8PQ5T2L2 129 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 LINC00322Q6ZN03 302 aaPredicted RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 LINC00052Q96N35 136 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 PFDN5Q99471 154 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 MRPL32Q9BYC8 188 aaKnown RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 ZNF331Q9NQX6 463 aaPredicted RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 TMEM14CQ9P0S9 112 aa4.78□□□□□ -1.64
CD44-214ENST00000525211 YTHDF2Q9Y5A9 579 aaKnown RBP4.78□□□□□ -1.64
CD44-214ENST00000525211 HELTA6NFD8 242 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 NBEAP1P0C6P0 100 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 RPL35AP18077 110 aaKnown RBP4.77□□□□□ -1.65
CD44-214ENST00000525211 RPL7P18124 248 aaKnown RBP4.77□□□□□ -1.65
CD44-214ENST00000525211 GALR1P47211 349 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 FXYD7P58549 80 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 RHOBP62745 196 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 GNG5P63218 68 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 ERCC8Q13216 396 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 BPIFA4PQ86YQ2 179 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 SUN5Q8TC36 379 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 MBD3L1Q8WWY6 194 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 NARS2Q96I59 477 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms