RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PRR20BP86481 221 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 PRR20AP86496 221 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 OPCMLQ14982 345 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 Q6ZRG5 221 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 LINC00476Q8WZB0 136 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 NMES1Q9C002 83 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
TRAPPC4-205ENST00000525079 CXCL3P19876 107 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 EMP1P54849 157 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 H2BFSP57053 126 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 PSG3Q16557 428 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 ATP6V1FQ16864 119 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 ZNF705AQ6ZN79 300 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 SLC39A9Q9NUM3 307 aa9.25□□□□□ -0.93
TRAPPC4-205ENST00000525079 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 E5RGE8 158 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 M0R2Z0 102 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 B2MP61769 119 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 Q6ZTC4 211 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 OR11H7Q8NGC8 314 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 OR5C1Q8NGR4 320 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 THAP6Q8TBB0 222 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 HRH4Q9H3N8 390 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 RNF24Q9Y225 148 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
TRAPPC4-205ENST00000525079 A8MTW9 85 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 IGLL5B9A064 214 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 H3BQ15 152 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 SLC17A3O00476 420 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 RHOBP62745 196 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 CLINT1Q14677 625 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 C2CD4CQ8TF44 421 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 PPP1R1CQ8WVI7 109 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 RPUSD4Q96CM3 377 aaKnown RBP9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 NEU1Q99519 415 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 RNF126Q9BV68 326 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
TRAPPC4-205ENST00000525079 DNAH1Q9P2D7 4330 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 PRM2P04554 102 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 GCSAMLQ5JQS6 135 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 LCN15Q6UWW0 184 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 PFDN5Q99471 154 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 NPCDR1Q9BY65 106 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 ZNF331Q9NQX6 463 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 PLECQ15149 4684 aaKnown RBP9.22□□□□□ -0.93
TRAPPC4-205ENST00000525079 TRAV12-2A0A075B6T6 113 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 C11orf94C9JXX5 98 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 CRXO43186 299 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 HBE1P02100 147 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 IGLC2P0DOY2 106 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 BAP18Q8IXM2 172 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 CHAC2Q8WUX2 184 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.94
TRAPPC4-205ENST00000525079 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 LOC102723971A0A1B0GUV8 181 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 ZNF705GA8MUZ8 300 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 MPDU1O75352 247 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 MPC2O95563 127 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 AMBPP02760 352 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 SPART-AS1P0CW21 52 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 CXCL2P19875 107 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 SMIM3Q9BZL3 60 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 ALG5Q9Y673 324 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 HYDINQ4G0P3 5121 aa9.2□□□□□ -0.94
TRAPPC4-205ENST00000525079 DEFB131BA0A096LNP1 70 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 INSP01308 110 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 PYYP10082 97 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 WDR61Q9GZS3 305 aaKnown RBP9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 MBD2Q9UBB5 411 aa9.19□□□□□ -0.94
TRAPPC4-205ENST00000525079 YTHDF2Q9Y5A9 579 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms