RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 FCN2Q15485 313 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 SPANXN2Q5MJ10 180 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 C16orf74Q96GX8 76 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 SMIM8Q96KF7 97 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 NPVFQ9HCQ7 196 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 RNF24Q9Y225 148 aa11.43□□□□□ -0.58
HIF3A-208ENST00000524533 NAP1L6A6NFF2 107 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 K7EPK0 472 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-208ENST00000524533 HTN1P15515 57 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 ANXA7P20073 488 aaKnown RBP11.42□□□□□ -0.58
HIF3A-208ENST00000524533 TAS2R60P59551 318 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 TRIQKQ629K1 86 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 TEPPQ6URK8 271 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 RPUSD4Q96CM3 377 aaKnown RBP11.42□□□□□ -0.58
HIF3A-208ENST00000524533 SRRQ9GZT4 340 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 ARV1Q9H2C2 271 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 FLVCR2Q9UPI3 526 aa11.42□□□□□ -0.58
HIF3A-208ENST00000524533 NBDYA0A0U1RRE5 68 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 CBY3A6NI87 242 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 OR4E1P0C645 316 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 CXCL2P19875 107 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 CDKN1BP46527 198 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 LCN15Q6UWW0 184 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 PATE2Q6UY27 113 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 ZNF546Q86UE3 836 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 MUC4Q99102 2169 aa11.41□□□□□ -0.58
HIF3A-208ENST00000524533 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
HIF3A-208ENST00000524533 TSC22D2O75157 780 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 CCL18P55774 89 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-208ENST00000524533 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 PXDC1Q5TGL8 231 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 SLC50A1Q9BRV3 221 aa11.4□□□□□ -0.58
HIF3A-208ENST00000524533 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-208ENST00000524533 ABCA13Q86UQ4 5058 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 GOSR2O14653 212 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 TAS2R30P59541 319 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 TNP2Q05952 138 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 BAK1Q16611 211 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 LINC00305Q7Z4B0 112 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 C6orf223Q8N319 242 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 ZBTB8BQ8NAP8 495 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-208ENST00000524533 TMEM263Q8WUH6 116 aaKnown RBP11.39□□□□□ -0.59
HIF3A-208ENST00000524533 RNF141Q8WVD5 230 aa11.39□□□□□ -0.59
HIF3A-208ENST00000524533 ZNF331Q9NQX6 463 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-208ENST00000524533 RCL1Q9Y2P8 373 aaKnown RBP11.39□□□□□ -0.59
HIF3A-208ENST00000524533 LINC00854A0A1B0GVQ3 168 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 H7BYZ3 331 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 AGPAT2O15120 278 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 CLINT1Q14677 625 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
HIF3A-208ENST00000524533 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
HIF3A-208ENST00000524533 LINC00588Q9Y4M8 146 aa11.38□□□□□ -0.59
HIF3A-208ENST00000524533 CENPXA8MT69 81 aa11.37□□□□□ -0.59
HIF3A-208ENST00000524533 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
HIF3A-208ENST00000524533 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
HIF3A-208ENST00000524533 BPIFA4PQ86YQ2 179 aa11.37□□□□□ -0.59
HIF3A-208ENST00000524533 GSKIPQ9P0R6 139 aa11.37□□□□□ -0.59
HIF3A-208ENST00000524533 C16orf90A8MZG2 172 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 SLC17A3O00476 420 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 BTCP35070 178 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 GGACTQ9BVM4 153 aa11.36□□□□□ -0.59
HIF3A-208ENST00000524533 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-208ENST00000524533 RBM38Q9H0Z9 239 aaKnown RBP11.36□□□□□ -0.59
HIF3A-208ENST00000524533 C7orf66A4D0T2 115 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 H3BTX0 84 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 C10orf113Q5VZT2 155 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 SSX7Q7RTT5 188 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 CCDC28AQ8IWP9 274 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 MGST2Q99735 147 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 PXMP4Q9Y6I8 212 aa11.35□□□□□ -0.59
HIF3A-208ENST00000524533 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 L7N2F9 121 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 MBPP02686 304 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-208ENST00000524533 VAMP2P63027 116 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 OR5I1Q13606 314 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 OPCMLQ14982 345 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 MORN5Q5VZ52 161 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 TMEM37Q8WXS4 190 aa11.34□□□□□ -0.59
HIF3A-208ENST00000524533 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-208ENST00000524533 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
HIF3A-208ENST00000524533 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-208ENST00000524533 CCSO14618 274 aa11.33□□□□□ -0.6
HIF3A-208ENST00000524533 IGLC2P0DOY2 106 aa11.33□□□□□ -0.6
HIF3A-208ENST00000524533 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
HIF3A-208ENST00000524533 SDHCQ99643 169 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-208ENST00000524533 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms