RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 RETNQ9HD89 108 aa11.07□□□□□ -0.64
SF3B2-202ENST00000524475 ZNF331Q9NQX6 463 aaPredicted RBP11.07□□□□□ -0.64
SF3B2-202ENST00000524475 A0A0J9YX75 114 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-202ENST00000524475 GIG44P09565 113 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-202ENST00000524475 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
SF3B2-202ENST00000524475 PDE6HQ13956 83 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 OR2G3Q8NGZ4 309 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 SAT2Q96F10 170 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-202ENST00000524475 PSMG3Q9BT73 122 aaPredicted RBP11.06□□□□□ -0.64
SF3B2-202ENST00000524475 FUT9Q9Y231 359 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 CSMD3Q7Z407 3707 aa11.06□□□□□ -0.64
SF3B2-202ENST00000524475 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
SF3B2-202ENST00000524475 PSG3Q16557 428 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 FFAR4Q5NUL3 377 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 GDF5OSQ5U4N7 250 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 Q6ZNX1 250 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 SLC25A2Q9BXI2 301 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
SF3B2-202ENST00000524475 HMSDA8MTL9 139 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 H3BQ15 152 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 TAAR5O14804 337 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 C4BPBP20851 252 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 ZNF345Q14585 488 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 LRRC20Q8TCA0 184 aa11.04□□□□□ -0.64
SF3B2-202ENST00000524475 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
SF3B2-202ENST00000524475 M6PRP20645 277 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 RHOBP62745 196 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 SERF2P84101 59 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-202ENST00000524475 MIR17HGQ75NE6 70 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
SF3B2-202ENST00000524475 BORCS7-ASMTA0A0B4J1R7 106 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 SLC17A3O00476 420 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 ATP6V0CP27449 155 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 DEFB1P60022 68 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF738Q8NE65 137 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-202ENST00000524475 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
SF3B2-202ENST00000524475 OR51M1Q9H341 326 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF705EA8MWA4 302 aaPredicted RBP11.01□□□□□ -0.65
SF3B2-202ENST00000524475 F6UB75 175 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 ARPC5O15511 151 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 JTBO76095 146 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 MBP02144 154 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 TAS2R45P59539 299 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 PSG9Q00887 426 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 KHDC3LQ587J8 217 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 AMTNQ6UX39 209 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 HSD17B11Q8NBQ5 300 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 OR8A1Q8NGG7 326 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 MFFQ9GZY8 342 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
SF3B2-202ENST00000524475 C3orf84H3BNL1 204 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 NDUFB4O95168 129 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 AMBPP02760 352 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 PYYP10082 97 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 HLA-DMBP28068 263 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 CNN1P51911 297 aaKnown RBP11□□□□□ -0.65
SF3B2-202ENST00000524475 RPL7L1Q6DKI1 246 aaKnown RBP11□□□□□ -0.65
SF3B2-202ENST00000524475 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
SF3B2-202ENST00000524475 FXYD5Q96DB9 178 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 RARRES2Q99969 163 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 PAXXQ9BUH6 204 aa11□□□□□ -0.65
SF3B2-202ENST00000524475 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
SF3B2-202ENST00000524475 SMLR1H3BR10 107 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 PQLC2Q6ZP29 291 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 OR11H4Q8NGC9 324 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 MUC7Q8TAX7 377 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 RNF141Q8WVD5 230 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 ST6GAL2Q96JF0 529 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 RFNGQ9Y644 331 aa10.99□□□□□ -0.65
SF3B2-202ENST00000524475 DYNC2H1Q8NCM8 4307 aaKnown RBP10.98□□□□□ -0.65
SF3B2-202ENST00000524475 A0A0D9SG52 128 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 H3BTX0 84 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 OR7C2O60412 319 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
SF3B2-202ENST00000524475 RAB2AP61019 212 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-202ENST00000524475 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
SF3B2-202ENST00000524475 OR10G4Q8NGN3 311 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 OR10G9Q8NGN4 311 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 OR10G7Q8NGN6 311 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 IL17DQ8TAD2 202 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms