RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CCDC190Q86UF4 302 aa9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 ZNF680Q8NEM1 530 aa9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 LHFPL5Q8TAF8 219 aa9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 S100A16Q96FQ6 103 aaKnown RBP9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 MRPL32Q9BYC8 188 aaKnown RBP9.08□□□□□ -0.96
NKX3-1-202ENST00000523261 E5RGE8 158 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 CDS2O95674 445 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 ORM2P19652 201 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 MEF2DQ14814 521 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 LGI3Q8N145 548 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 GPX8Q8TED1 209 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 VGLL1Q99990 258 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
NKX3-1-202ENST00000523261 A0A087X0K7 114 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 H3BRN7 92 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 J3KRW8 73 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 LELP1Q5T871 98 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 MORN5Q5VZ52 161 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 LHFPL1Q86WI0 220 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 TMEM147Q9BVK8 224 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 TMEM222Q9H0R3 208 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 COPZ2Q9P299 210 aa9.06□□□□□ -0.96
NKX3-1-202ENST00000523261 CCNKO75909 580 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 RPL7P18124 248 aaKnown RBP9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 TCL1AP56279 114 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 ODF1Q14990 250 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 STEAP1BQ6NZ63 245 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 TMEM182Q6ZP80 229 aaPredicted RBP9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 GLYATL2Q8WU03 294 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 SSR3Q9UNL2 185 aa9.05□□□□□ -0.96
NKX3-1-202ENST00000523261 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 B3GALNT1O75752 331 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 GPR107Q5VW38 600 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 SELENOHQ8IZQ5 122 aaKnown RBP9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 BPIFCQ8NFQ6 507 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 LRRC20Q8TCA0 184 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 DTD1Q8TEA8 209 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 BLNKQ8WV28 456 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 PCNPQ8WW12 178 aaKnown RBP9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 SHANK2-AS3Q9BTD1 123 aa9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
NKX3-1-202ENST00000523261 LINC00854A0A1B0GVQ3 168 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 S100A7P31151 101 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 TNFSF8P32971 234 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 UBE2NLQ5JXB2 153 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 TMEM37Q8WXS4 190 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 RBKSQ9H477 322 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 HSPB7Q9UBY9 170 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
NKX3-1-202ENST00000523261 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 ORM1P02763 201 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 LEPP41159 167 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 TIRAPP58753 221 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 LAGE3Q14657 143 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 PAXXQ9BUH6 204 aa9.02□□□□□ -0.97
NKX3-1-202ENST00000523261 SULT1A3P0DMM9 295 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 SULT1A4P0DMN0 295 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 OR13C8Q8NGS7 320 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 OR1S1Q8NH92 325 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 ZFAND1Q8TCF1 268 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 VCXQ9H320 206 aa9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 ZNF331Q9NQX6 463 aaPredicted RBP9.01□□□□□ -0.97
NKX3-1-202ENST00000523261 TEX13DA0A0J9YY54 714 aaPredicted RBP9□□□□□ -0.97
NKX3-1-202ENST00000523261 TMEM127O75204 238 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 IGHV3-30P01768 117 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 IGHV3-33P01772 117 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 IGHV3-30-3P0DP02 117 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 IBA57Q5T440 356 aaKnown RBP9□□□□□ -0.97
NKX3-1-202ENST00000523261 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 SAMD12Q8N8I0 201 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 ZBTB8BQ8NAP8 495 aaPredicted RBP9□□□□□ -0.97
NKX3-1-202ENST00000523261 BAALCQ8WXS3 180 aa9□□□□□ -0.97
NKX3-1-202ENST00000523261 C7orf71A4D174 169 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 CXCL2P19875 107 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 RAP2BP61225 183 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 ZNF846Q147U1 533 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 ZNF479Q96JC4 524 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 SLC25A31Q9H0C2 315 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 HIGD1AQ9Y241 93 aa8.99□□□□□ -0.97
NKX3-1-202ENST00000523261 FAT4Q6V0I7 4981 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
NKX3-1-202ENST00000523261 C9JCJ5 164 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms