RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ATP5G3P48201 142 aa10.8□□□□□ -0.68
MRPS28-209ENST00000522987 PATE2Q6UY27 113 aa10.8□□□□□ -0.68
MRPS28-209ENST00000522987 RNF141Q8WVD5 230 aa10.8□□□□□ -0.68
MRPS28-209ENST00000522987 RPUSD4Q96CM3 377 aaKnown RBP10.8□□□□□ -0.68
MRPS28-209ENST00000522987 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
MRPS28-209ENST00000522987 LINC00588Q9Y4M8 146 aa10.8□□□□□ -0.68
MRPS28-209ENST00000522987 TSPOP30536 169 aa10.79□□□□□ -0.68
MRPS28-209ENST00000522987 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
MRPS28-209ENST00000522987 ID3Q02535 119 aa10.79□□□□□ -0.68
MRPS28-209ENST00000522987 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
MRPS28-209ENST00000522987 S100A7P31151 101 aa10.78□□□□□ -0.68
MRPS28-209ENST00000522987 S100A5P33763 92 aa10.78□□□□□ -0.68
MRPS28-209ENST00000522987 OR5I1Q13606 314 aa10.78□□□□□ -0.68
MRPS28-209ENST00000522987 CLINT1Q14677 625 aa10.78□□□□□ -0.68
MRPS28-209ENST00000522987 ARV1Q9H2C2 271 aa10.78□□□□□ -0.68
MRPS28-209ENST00000522987 A0A087X0K7 114 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 A0A0J9YY99 117 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 CBY3A6NI87 242 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 INPP1P49441 399 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 CCL18P55774 89 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 TAS2R60P59551 318 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 B2MP61769 119 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 DLK1P80370 383 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 C16orf74Q96GX8 76 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 GSKIPQ9P0R6 139 aa10.77□□□□□ -0.69
MRPS28-209ENST00000522987 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
MRPS28-209ENST00000522987 SLC17A3O00476 420 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 MRPS12O15235 138 aaKnown RBP10.76□□□□□ -0.69
MRPS28-209ENST00000522987 CDKN1BP46527 198 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 FAM3BP58499 235 aaPredicted RBP10.76□□□□□ -0.69
MRPS28-209ENST00000522987 PLP1P60201 277 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 SSX7Q7RTT5 188 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 TMEM256Q8N2U0 113 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 SMIM8Q96KF7 97 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 MGAT4CQ9UBM8 478 aa10.76□□□□□ -0.69
MRPS28-209ENST00000522987 GAGE12BA1L429 117 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 GOSR2O14653 212 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 GAGE7O76087 117 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 NDUFB6O95139 128 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 OR4E1P0C645 316 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 GAGE12FP0CL80 117 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 GAGE12GP0CL81 117 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 GAGE12IP0CL82 117 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 SELENOTP62341 195 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 BAK1Q16611 211 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
MRPS28-209ENST00000522987 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 TMEM14EPQ6UXP3 125 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 LINC00305Q7Z4B0 112 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 MAPKAPK5-AS1Q8N8E1 139 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 OR10P1Q8NGE3 313 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 SRRQ9GZT4 340 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 HSPG2P98160 4391 aa10.75□□□□□ -0.69
MRPS28-209ENST00000522987 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 CCSO14618 274 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 AGPAT2O15120 278 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 TEPPQ6URK8 271 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 RNASE8Q8TDE3 154 aaKnown RBP10.74□□□□□ -0.69
MRPS28-209ENST00000522987 TMEM263Q8WUH6 116 aaKnown RBP10.74□□□□□ -0.69
MRPS28-209ENST00000522987 GNPNAT1Q96EK6 184 aaPredicted RBP10.74□□□□□ -0.69
MRPS28-209ENST00000522987 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
MRPS28-209ENST00000522987 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
MRPS28-209ENST00000522987 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
MRPS28-209ENST00000522987 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 HOXA5P20719 270 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 TRIQKQ629K1 86 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 ZBTB8BQ8NAP8 495 aaPredicted RBP10.73□□□□□ -0.69
MRPS28-209ENST00000522987 MGST2Q99735 147 aa10.73□□□□□ -0.69
MRPS28-209ENST00000522987 TRAV5A0A0B4J249 113 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 H7BYZ3 331 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 OPCMLQ14982 345 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 SPANXN2Q5MJ10 180 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 ZNF546Q86UE3 836 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 OR10J6PQ8NGY7 276 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 Q9H8V8 135 aa10.72□□□□□ -0.69
MRPS28-209ENST00000522987 H3BQ15 152 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 ZNF701M0R085 212 aaPredicted RBP10.71□□□□□ -0.69
MRPS28-209ENST00000522987 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.69
MRPS28-209ENST00000522987 BTCP35070 178 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 CCDC28AQ8IWP9 274 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 DEDD2Q8WXF8 326 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
MRPS28-209ENST00000522987 LSM5Q9Y4Y9 91 aaKnown RBP10.71□□□□□ -0.69
MRPS28-209ENST00000522987 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 FAM25EA8MYX2 175 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 SNURFLB1AK76 121 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 K7EPK0 472 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms