RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FAM24AA6NFZ4 105 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 FNDC10F2Z333 226 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 SULT1A1P50225 295 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 AP2S1P53680 142 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-210ENST00000522843 MFAP4P55083 255 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 S100A10P60903 97 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 PRCDQ00LT1 54 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 NDUFA5Q16718 116 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 IZUMO4Q1ZYL8 232 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 VWC2Q2TAL6 325 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 KLK9Q2XQG4 91 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 C15orf32Q32M92 178 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 VMA21Q3ZAQ7 101 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 RBPMS2Q6ZRY4 209 aaKnown RBP4.72□□□□□ -1.65
SDCBP-210ENST00000522843 BAP18Q8IXM2 172 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 NECAP1Q8NC96 275 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 OR1L8Q8NGR8 309 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 RNASE11Q8TAA1 199 aaKnown RBP4.72□□□□□ -1.65
SDCBP-210ENST00000522843 C18orf15Q96N68 181 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 RBKSQ9H477 322 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 PSENENQ9NZ42 101 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 KLK9Q9UKQ9 250 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 LSM5Q9Y4Y9 91 aaKnown RBP4.72□□□□□ -1.65
SDCBP-210ENST00000522843 DNAH8Q96JB1 4490 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 DEFB131BA0A096LNP1 70 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 IGSF23A1L1A6 192 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 CBY3A6NI87 242 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 WRBO00258 174 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 DFFBO76075 338 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 CFDP00746 253 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 GIG44P09565 113 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 SEC11BP0C7V7 166 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 SAA1P0DJI8 122 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 TPT1P13693 172 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 CAMPP49913 170 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 RPL8P62917 257 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 PRSS8Q16651 343 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 C12orf74Q32Q52 190 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 C2orf83Q53S99 150 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 OR2B11Q5JQS5 317 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 SOHLH1Q5JUK2 328 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 CLLU1Q5K131 121 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 C10orf55Q5SWW7 151 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 HSD17B13Q7Z5P4 300 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 SPATA12Q7Z6I5 190 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 MMD2Q8IY49 270 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 VKORC1L1Q8N0U8 176 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 TTC9CQ8N5M4 171 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 LRRC20Q8TCA0 184 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 DTD1Q8TEA8 209 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 SRSF12Q8WXF0 261 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 GINS3Q9BRX5 216 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 MAGT1Q9H0U3 335 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 WFDC1Q9HC57 220 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 MED9Q9NWA0 146 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 MDFICQ9P1T7 246 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 PAIP2BQ9ULR5 123 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 STRAPQ9Y3F4 350 aaKnown RBP4.71□□□□□ -1.66
SDCBP-210ENST00000522843 OR51B2Q9Y5P1 312 aa4.71□□□□□ -1.66
SDCBP-210ENST00000522843 BORCS7-ASMTA0A0B4J1R7 106 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 LINC00862A6NCI5 91 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 C15orf62A8K5M9 175 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 PRSS46E5RG02 174 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 SSSCA1O60232 199 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 IFNA17P01571 189 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 SPP1P10451 314 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 GPX4P36969 197 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-210ENST00000522843 HTR2BP41595 481 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 RAB5CP51148 216 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 XGP55808 180 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 OR2B8PP59922 312 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 HBG1P69891 147 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 HBG2P69892 147 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 ARL16Q0P5N6 197 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF266Q14584 549 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 FAM106AQ4KMX7 169 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 STX12Q86Y82 276 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 LYPD6BQ8NI32 183 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 PINX1Q96BK5 328 aaKnown RBP4.7□□□□□ -1.66
SDCBP-210ENST00000522843 BSCL2Q96G97 398 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-210ENST00000522843 NDUFAF3Q9BU61 184 aa4.7□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF430Q9H8G1 570 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-210ENST00000522843 MRPL27Q9P0M9 148 aaKnown RBP4.7□□□□□ -1.66
SDCBP-210ENST00000522843 IGHV3-35A0A0C4DH35 117 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 A0A1B0GW64 132 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 RPS10-NUDT3A0A1W2PQS6 291 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 MFSD2BA6NFX1 497 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 CEBPZOSA8MTT3 80 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 RHODO00212 210 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 NDUFB4O95168 129 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 CA1P00915 261 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-210ENST00000522843 IFNA10P01566 189 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 CAV2P51636 162 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 RAB11AP62491 216 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 ERHP84090 104 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms