RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 K7EQG2 157 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 TCAPO15273 167 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 ARPC5O15511 151 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 EIF3GO75821 320 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 MPC2O95563 127 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 CA1P00915 261 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 SLC25A4P12235 298 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 OPRK1P41145 380 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 NANOS2P60321 138 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 FAM219AQ8IW50 185 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 C11orf45Q8TAV5 145 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 GPR146Q96CH1 333 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 METTL26Q96S19 204 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 GSKIPQ9P0R6 139 aa6.75□□□□□ -1.33
CTNNA1-221ENST00000520339 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 IGLC1P0CG04 106 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 P2RY1P47900 373 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 ZNF345Q14585 488 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 TIGITQ495A1 244 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 NMSQ5H8A3 153 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 PRSS54Q6PEW0 395 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 RPP25LQ8N5L8 163 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 TMEM170AQ8WVE7 144 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 PFDN5Q99471 154 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 MFFQ9GZY8 342 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 RABAC1Q9UI14 185 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 TNFSF18Q9UNG2 199 aa6.74□□□□□ -1.33
CTNNA1-221ENST00000520339 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 A0A0D9SG52 128 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 DEFB4AO15263 64 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 RLN2P04090 185 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 SLC25A6P12236 298 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 CXCL2P19875 107 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 RAB5BP61020 215 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 RPP30P78346 268 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 IL15RAQ13261 267 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 MAJINQ3KP22 176 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 LGALSLQ3ZCW2 172 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 C2orf83Q53S99 150 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 MRPL52Q86TS9 123 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 ZNF546Q86UE3 836 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 STHQ8IWL8 128 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 Q8NAQ8 132 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 INO80EQ8NBZ0 244 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 STXBP6Q8NFX7 210 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 OR1S2Q8NGQ3 325 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 RNASEH2CQ8TDP1 164 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 LINC00052Q96N35 136 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 CACNG5Q9UF02 275 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 FBXL17Q9UF56 701 aa6.73□□□□□ -1.33
CTNNA1-221ENST00000520339 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 K7EPK0 472 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 SCGB2A1O75556 95 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 DEDDO75618 318 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 ZNF688P0C7X2 276 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 RBMY1A1P0DJD3 496 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 RBMY1CP0DJD4 496 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 S100A11P31949 105 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 OR2F1Q13607 317 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 RBMY1FQ15415 496 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 TMEM41BQ5BJD5 291 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 UQCC3Q6UW78 93 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 ACOT7LQ6ZUV0 252 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 OR4D5Q8NGN0 318 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 OR1S1Q8NH92 325 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 Q8WTZ3 238 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 NARS2Q96I59 477 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 NKX6-2Q9C056 277 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 ARL6Q9H0F7 186 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 TMPRSS5Q9H3S3 457 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 LSM5Q9Y4Y9 91 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
CTNNA1-221ENST00000520339 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 A0A1B0GV90 55 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 RNF222A6NCQ9 220 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 C5orf52A6NGY3 159 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 CEBPZOSA8MTT3 80 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 ZNF705EA8MWA4 302 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 E5RGE8 158 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 BCL2L11O43521 198 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 SPP1P10451 314 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 PVALBP20472 110 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 OR10J1P30954 320 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 NKX2-1P43699 371 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 RND2P52198 227 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 NUTF2P61970 127 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 OPCMLQ14982 345 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 MORN3Q6PF18 240 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 KCNRGQ8N5I3 272 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 DTD1Q8TEA8 209 aa6.71□□□□□ -1.34
CTNNA1-221ENST00000520339 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms