RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 NBEAP1P0C6P0 100 aa13.33□□□□□ -0.28
SDC2-205ENST00000520233 UBE2L3P68036 154 aaKnown RBP13.33□□□□□ -0.28
SDC2-205ENST00000520233 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
SDC2-205ENST00000520233 SFT2D1Q8WV19 159 aa13.33□□□□□ -0.28
SDC2-205ENST00000520233 TRBV19A0A075B6N1 114 aa13.32□□□□□ -0.28
SDC2-205ENST00000520233 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
SDC2-205ENST00000520233 SOCS3O14543 225 aa13.32□□□□□ -0.28
SDC2-205ENST00000520233 SNRPCP09234 159 aaKnown RBP13.32□□□□□ -0.28
SDC2-205ENST00000520233 GCHFRP30047 84 aa13.32□□□□□ -0.28
SDC2-205ENST00000520233 PDE6HQ13956 83 aa13.32□□□□□ -0.28
SDC2-205ENST00000520233 SAT2Q96F10 170 aaPredicted RBP13.32□□□□□ -0.28
SDC2-205ENST00000520233 H3BTX0 84 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 ZNF253O75346 499 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 FGF8P55075 233 aaPredicted RBP13.31□□□□□ -0.28
SDC2-205ENST00000520233 BLOC1S1P78537 153 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 SUN5Q8TC36 379 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 LRRC20Q8TCA0 184 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 C16orf92Q96LL3 132 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 SLC50A1Q9BRV3 221 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
SDC2-205ENST00000520233 VWFP04275 2813 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 TRAV1-1A0A0B4J248 108 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 ISLRO14498 428 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 ID1P41134 155 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 PSMB3P49720 205 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 KPRPQ5T749 579 aaPredicted RBP13.3□□□□□ -0.28
SDC2-205ENST00000520233 BLNKQ8WV28 456 aa13.3□□□□□ -0.28
SDC2-205ENST00000520233 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
SDC2-205ENST00000520233 TEX46H3BTG2 121 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 NDUFB4O95168 129 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 HBE1P02100 147 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
SDC2-205ENST00000520233 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 FAM24BQ8N5W8 94 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 FAM110AQ9BQ89 295 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 TMPRSS5Q9H3S3 457 aa13.29□□□□□ -0.28
SDC2-205ENST00000520233 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 SLC17A3O00476 420 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 SNRPD3P62318 126 aaKnown RBP13.28□□□□□ -0.28
SDC2-205ENST00000520233 PSG9Q00887 426 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 IFITM2Q01629 132 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 LYPD1Q8N2G4 141 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 CLEC5AQ9NY25 188 aa13.28□□□□□ -0.28
SDC2-205ENST00000520233 CD7P09564 240 aa13.27□□□□□ -0.29
SDC2-205ENST00000520233 ZNF688P0C7X2 276 aa13.27□□□□□ -0.29
SDC2-205ENST00000520233 CD81P60033 236 aa13.27□□□□□ -0.29
SDC2-205ENST00000520233 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
SDC2-205ENST00000520233 A0A1B0GV50 99 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 RANP62826 216 aaKnown RBP13.26□□□□□ -0.29
SDC2-205ENST00000520233 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 IGFL4Q6B9Z1 124 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 ZNF767PQ75MW2 155 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 PRR25Q96S07 402 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 AAMDCQ9H7C9 122 aa13.26□□□□□ -0.29
SDC2-205ENST00000520233 OR11H12B2RN74 326 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 PPT1P50897 306 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 DEFB131AP59861 70 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 CCL20P78556 96 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 PSG3Q16557 428 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 PSMG4Q5JS54 123 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 LYPD6BQ8NI32 183 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 LINC00052Q96N35 136 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 Q9H3A6 140 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 C19orf73Q9NVV2 129 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 PRELID1Q9Y255 219 aa13.25□□□□□ -0.29
SDC2-205ENST00000520233 A0A1W2PRE2 83 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 Q8N1Y9 231 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 EXOC3-AS1Q8N2X6 119 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 MRPL53Q96EL3 112 aaKnown RBP13.24□□□□□ -0.29
SDC2-205ENST00000520233 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
SDC2-205ENST00000520233 PMS2P11Q13670 270 aa13.23□□□□□ -0.29
SDC2-205ENST00000520233 ICAM4Q14773 271 aa13.23□□□□□ -0.29
SDC2-205ENST00000520233 DNHD1Q96M86 4753 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 PGPA6NDG6 321 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 FAM74A7A6NL05 159 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 NMBP08949 121 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 UBE2G2P60604 165 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 ZNF738Q8NE65 137 aa13.22□□□□□ -0.29
SDC2-205ENST00000520233 NKX6-2Q9C056 277 aaPredicted RBP13.22□□□□□ -0.29
SDC2-205ENST00000520233 YTHDF2Q9Y5A9 579 aaKnown RBP13.22□□□□□ -0.29
SDC2-205ENST00000520233 NOTCH3Q9UM47 2321 aa13.21□□□□□ -0.29
SDC2-205ENST00000520233 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
SDC2-205ENST00000520233 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
SDC2-205ENST00000520233 RPUSD4Q96CM3 377 aaKnown RBP13.21□□□□□ -0.29
SDC2-205ENST00000520233 MANBALQ9NQG1 85 aa13.21□□□□□ -0.29
SDC2-205ENST00000520233 GNG13Q9P2W3 67 aa13.21□□□□□ -0.29
SDC2-205ENST00000520233 ZNF705FA8MVS1 300 aaPredicted RBP13.2□□□□□ -0.3
SDC2-205ENST00000520233 GGTLC3B5MD39 225 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 M0R3E3 92 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 PAGE4O60829 102 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 IFNA1P01562 189 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 RAB14P61106 215 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms