RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 FNDC4Q9H6D8 234 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 PXMP4Q9Y6I8 212 aa13.81□□□□□ -0.2
CTNNA1-213ENST00000519113 TRAV10A0A0B4J240 114 aa13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 K7EIM0 57 aa13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 M6PRP20645 277 aa13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 RPL29P47914 159 aaKnown RBP13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 FAM90A2PQ658T7 463 aa13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 SFT2D1Q8WV19 159 aa13.8□□□□□ -0.2
CTNNA1-213ENST00000519113 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 MT-CO2P00403 227 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 HLA-DMBP28068 263 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 OR10J1P30954 320 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 B2MP61769 119 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 Q8NAQ8 132 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 MBD3L1Q8WWY6 194 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 NPIPB3Q92617 1050 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
CTNNA1-213ENST00000519113 IGHV4-4A0A075B6R2 117 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 A0A1B0GV50 99 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 PRSS29PA6NIE9 313 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 DNASE2O00115 360 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 RND2P52198 227 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 DNAH17Q9UFH2 4485 aa13.78□□□□□ -0.2
CTNNA1-213ENST00000519113 CTXND1A0A1B0GTU2 59 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 IGHV3-48P01763 117 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 MIFP14174 115 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 CYP2G1PQ6ZSU1 146 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 STHQ8IWL8 128 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 THAP8Q8NA92 274 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 TXN2Q99757 166 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 PBDC1Q9BVG4 233 aa13.77□□□□□ -0.21
CTNNA1-213ENST00000519113 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 IGHV4-28A0A0C4DH34 117 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 A0A1W2PPV4 95 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 I3L2K1 104 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 RBMY1A1P0DJD3 496 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 RBMY1CP0DJD4 496 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 MFAP4P55083 255 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 DEFB131AP59861 70 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 PEA15Q15121 130 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 RBMY1FQ15415 496 aaKnown RBP13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 ZNF726P1Q15940 193 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 LCN15Q6UWW0 184 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 Q6ZTC4 211 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 BPIFCQ8NFQ6 507 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
CTNNA1-213ENST00000519113 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 MAP1LC3B2A6NCE7 125 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 LINC00869P0C866 280 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 POM121L12Q8N7R1 296 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 TRGV9Q99603 122 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 MAP1LC3BQ9GZQ8 125 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 MS4A6AQ9H2W1 248 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 SLC25A22Q9H936 323 aa13.75□□□□□ -0.21
CTNNA1-213ENST00000519113 MUC4Q99102 2169 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 KRBOX1C9JBD0 128 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 P0DMU3 169 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 SELENOTP62341 195 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 CCL20P78556 96 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 GUK1Q16774 197 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 RAB24Q969Q5 203 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 NARS2Q96I59 477 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-213ENST00000519113 DYNC1H1Q14204 4646 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 RTL8CO15255 209 aa13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 RHOBP62745 196 aa13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 GCSAMLQ5JQS6 135 aa13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 TOR2AQ5JU69 321 aa13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 MORN3Q6PF18 240 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 SSX7Q7RTT5 188 aa13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 EIF5A2Q9GZV4 153 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-213ENST00000519113 DNAH11Q96DT5 4516 aa13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 IGKV1D-37A0A075B6S9 117 aa13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 FABP1P07148 127 aa13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 TMEM231Q9H6L2 316 aa13.72□□□□□ -0.21
CTNNA1-213ENST00000519113 RBFOX3A6NFN3 312 aa13.71□□□□□ -0.21
CTNNA1-213ENST00000519113 GNG7O60262 68 aa13.71□□□□□ -0.21
CTNNA1-213ENST00000519113 CLN5O75503 358 aa13.71□□□□□ -0.21
CTNNA1-213ENST00000519113 IFNA1P01562 189 aa13.71□□□□□ -0.21
CTNNA1-213ENST00000519113 AMBPP02760 352 aa13.71□□□□□ -0.21
CTNNA1-213ENST00000519113 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms