RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FGF6P10767 208 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 HLA-EP13747 358 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 UGT2B7P16662 529 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 HADHBP55084 474 aaKnown RBP-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 PPP1R1AQ13522 171 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 ZNF826PQ6ZT77 177 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 C11orf40Q8WZ69 217 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 CISHQ9NSE2 258 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 IL36BQ9NZH7 164 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 PRXQ9BXM0 1461 aa-0.05□□□□□ -2.42
SCARNA1-201ENST00000517138 SCN8AQ9UQD0 1980 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 BIRC5O15392 142 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 OR5F1O95221 314 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 SRP19P09132 144 aaKnown RBP-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 GDF5OSQ5U4N7 250 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 SYPL2Q5VXT5 272 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 HIST2H3AQ71DI3 136 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 KRTAP8-1Q8IUC2 63 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 TMEM161BQ8NDZ6 487 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 TNS3Q68CZ2 1445 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 RFX7Q2KHR2 1363 aa-0.06□□□□□ -2.42
SCARNA1-201ENST00000517138 PTPRDP23468 1912 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 TMEM213A2RRL7 107 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 A6NN06 94 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 LYNX1G3V0Z9 82 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 KRT75O95678 551 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 C1QAP02745 245 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 MT1FP04733 61 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 CTSDP07339 412 aaPredicted RBP-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 SPRNQ5BIV9 151 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 SDHAF4Q5VUM1 108 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 Q6ZQT0 140 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 LINC00311Q8N616 119 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 SPACA1Q9HBV2 294 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 DKKL1Q9UK85 242 aa-0.07□□□□□ -2.42
SCARNA1-201ENST00000517138 FUOMA2VDF0 154 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 TRPC5OSA6NMA1 111 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 M0R2T5 61 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 HPGDSO60760 199 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 NOS1APO75052 506 aaPredicted RBP-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 HYPMO75409 117 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 MT2AP02795 61 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 IL3P08700 152 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 CNBPP62633 177 aaKnown RBP-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 PDPK2PQ6A1A2 396 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 FUNDC1Q8IVP5 155 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 TMEM106AQ96A25 262 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 SMIM19Q96E16 107 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 DHRS9Q9BPW9 319 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 DAPK1P53355 1430 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 NUP210Q8TEM1 1887 aaPredicted RBP-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 DOCK4Q8N1I0 1966 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 KIAA1549Q9HCM3 1950 aa-0.08□□□□□ -2.42
SCARNA1-201ENST00000517138 ANKRD36CQ5JPF3 1778 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 DOCK1Q14185 1865 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 FABP5P3A8MUU1 101 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 F5H768 121 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 M0R2N4 97 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 YKT6O15498 198 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 CRYGAP11844 174 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 SPI1P17947 270 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 MAP2K4P45985 399 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 MAP3K7CLP57077 242 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 JOSD2Q8TAC2 188 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 DEFB104AQ8WTQ1 72 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 PLAC8Q9NZF1 115 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 MYH13Q9UKX3 1938 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 IQGAP3Q86VI3 1631 aa-0.09□□□□□ -2.42
SCARNA1-201ENST00000517138 CPSF1Q10570 1443 aaKnown RBP-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 OR1I1O60431 355 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 CD151P48509 253 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 HAMPP81172 84 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 FABP9Q0Z7S8 132 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 PDE6HQ13956 83 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 DEFB113Q30KQ7 82 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 DEFB121Q5J5C9 76 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 LINC00471Q8N535 108 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 TMEM70Q9BUB7 260 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 EFCAB1Q9HAE3 211 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 POLR1DQ9Y2S0 133 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 CITO14578 2027 aa-0.1□□□□□ -2.43
SCARNA1-201ENST00000517138 TRBV6-8A0A0A6YYG3 113 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 IQCF5A8MTL0 148 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 PRM2P04554 102 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 CDC34P49427 236 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 MGAT3Q09327 533 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 OOSP2Q86WS3 158 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 DNAJB3Q8WWF6 145 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 ROBO3Q96MS0 1386 aa-0.11□□□□□ -2.43
SCARNA1-201ENST00000517138 TRAV1-1A0A0B4J248 108 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 GOLGA8MH3BSY2 632 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 ZNF25P17030 456 aaPredicted RBP-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 RAB4BP61018 213 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 RSU1Q15404 277 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 IBA57Q5T440 356 aaKnown RBP-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 OR2T4Q8NH00 348 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 PPP1R14BQ96C90 147 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 KCTD7Q96MP8 289 aa-0.12□□□□□ -2.43
SCARNA1-201ENST00000517138 DOCK5Q9H7D0 1870 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms