RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
SCARNA18.1-201ENST00000516330 RFNGQ9Y644 331 aa4.34□□□□□ -1.71
SCARNA18.1-201ENST00000516330 PXMP4Q9Y6I8 212 aa4.34□□□□□ -1.71
SCARNA18.1-201ENST00000516330 DNAH1Q9P2D7 4330 aa4.34□□□□□ -1.72
SCARNA18.1-201ENST00000516330 INMT-MINDY4F8WBC2 141 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 CCNKO75909 580 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PTTG1O95997 202 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 IGLC2P0DOY2 106 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 CNN1P51911 297 aaKnown RBP4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RRN3P1Q2M238 152 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FAM78BQ5VT40 261 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 AMTNQ6UX39 209 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TMEM182Q6ZP80 229 aaPredicted RBP4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NRARPQ7Z6K4 114 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ZNF738Q8NE65 137 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 OR4B1Q8NGF8 309 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ASB13Q8WXK3 278 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RSG1Q9BU20 258 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RNF126Q9BV68 326 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 MRPL32Q9BYC8 188 aaKnown RBP4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 XCL2Q9UBD3 114 aa4.33□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TRAV8-2A0A0B4J237 113 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 IGSF23A1L1A6 192 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 LYRM9A8MSI8 78 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C17orf112F2Z3M2 114 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 CST7O76096 145 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SPART-AS1P0CW21 52 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 CDKN1BP46527 198 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PSG3Q16557 428 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 Q6ZTC4 211 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 OR11H7Q8NGC8 314 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 OR8A1Q8NGG7 326 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 LRRC20Q8TCA0 184 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TMEM37Q8WXS4 190 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C17orf77Q96MU5 243 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PARD6GQ9BYG4 376 aaPredicted RBP4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SLC39A9Q9NUM3 307 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PRELID1Q9Y255 219 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 AGRNO00468 2067 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 LOC102723971A0A1B0GUV8 181 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FAM24AA6NFZ4 105 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 F6UB75 175 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 LY6G6CO95867 125 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FGF7P21781 194 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 IFITM3Q01628 133 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FGL1Q08830 312 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 MIC13Q5XKP0 118 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PATE2Q6UY27 113 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C1orf158Q8N1D5 194 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 OR5C1Q8NGR4 320 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 OR10J6PQ8NGY7 276 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TMEM263Q8WUH6 116 aaKnown RBP4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 PPP1R1CQ8WVI7 109 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C16orf74Q96GX8 76 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C20orf173Q96LM9 149 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ATP5SQ99766 215 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NIPSNAP3BQ9BS92 247 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TMEM208Q9BTX3 173 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 WDR61Q9GZS3 305 aaKnown RBP4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SLC35B3Q9H1N7 401 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 AAMDCQ9H7C9 122 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 DKK2Q9UBU2 259 aa4.31□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TRBV19A0A075B6N1 114 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 DEFB131BA0A096LNP1 70 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NPIPB6E9PJ23 425 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 H7BYZ3 331 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 DEFB4AO15263 64 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SSNA1O43805 119 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 MPC2O95563 127 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 IGKV3-20P01619 116 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 P0DMU3 169 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FAM231AP0DMU4 169 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 FAM231CP0DMU5 169 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 HIST1H1EP10412 219 aaKnown RBP4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 H2BFSP57053 126 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 TAS2R60P59551 318 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 HIST1H1AQ02539 215 aaPredicted RBP4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ZNF266Q14584 549 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SPINK13Q1W4C9 94 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 LRRC37A5PQ49AS3 106 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 ZNF493Q6ZR52 646 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 C15orf53Q8NAA6 179 aa4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 SAT2Q96F10 170 aaPredicted RBP4.3□□□□□ -1.72
SCARNA18.1-201ENST00000516330 NDUFAF3Q9BU61 184 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms