RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 CACNA1EQ15878 2313 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 BANF1O75531 89 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 INSL3P51460 131 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 NCALDP61601 193 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 C6orf52Q5T4I8 152 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 S100A7AQ86SG5 101 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 OR4K15Q8NH41 348 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 PPTC7Q8NI37 304 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 JPT1Q9UK76 154 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 TRPM1Q7Z4N2 1603 aa0.04□□□□□ -2.4
CXXC4-203ENST00000515509 DUXBA0A1W2PPF3 345 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 hDV103S1A0JD37 113 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 C9orf170A2RU37 121 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 IFNA6P05013 189 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 ARPP19P56211 112 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 FXYD4P59646 89 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 VBP1P61758 197 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 FADDQ13158 208 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 EIF3IQ13347 325 aaKnown RBP0.03□□□□□ -2.4
CXXC4-203ENST00000515509 LRRC18Q8N456 261 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 TSKUQ8WUA8 353 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 ZHX1-C8orf76Q96EF9 292 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 TCEAL2Q9H3H9 227 aaPredicted RBP0.03□□□□□ -2.4
CXXC4-203ENST00000515509 CACYBPQ9HB71 228 aaKnown RBP0.03□□□□□ -2.4
CXXC4-203ENST00000515509 RNF11Q9Y3C5 154 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 ASB4Q9Y574 426 aa0.03□□□□□ -2.4
CXXC4-203ENST00000515509 MYO5AQ9Y4I1 1855 aaKnown RBP0.03□□□□□ -2.41
CXXC4-203ENST00000515509 FANCMQ8IYD8 2048 aa0.03□□□□□ -2.41
CXXC4-203ENST00000515509 CAMSAP1Q5T5Y3 1602 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 TNCP24821 2201 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 UBR2Q8IWV8 1755 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 ZNF727A8MUV8 499 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 CXCL1P09341 107 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 CCL4P13236 92 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 KDELR1P24390 212 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 KLRD1Q13241 179 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 DGCR14Q96DF8 476 aaKnown RBP0.02□□□□□ -2.41
CXXC4-203ENST00000515509 ZNF714Q96N38 554 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 ASH1LQ9NR48 2969 aaKnown RBP0.02□□□□□ -2.41
CXXC4-203ENST00000515509 NISCHQ9Y2I1 1504 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 FRMPD1Q5SYB0 1578 aa0.02□□□□□ -2.41
CXXC4-203ENST00000515509 DOCK4Q8N1I0 1966 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 GPR98Q8WXG9 6306 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 FREM3P0C091 2139 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 K7ERJ3 54 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 NDUFC2O95298 119 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 IGHV3-33P01772 117 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 TMBIM6P55061 237 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 REEP5Q00765 189 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 OCIAD2Q56VL3 154 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 Q6ZQY7 126 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 PLAC4Q8WY50 150 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 PRNDQ9UKY0 176 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 PYCARDQ9ULZ3 195 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 ADGRL3Q9HAR2 1447 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 NCAPD3P42695 1498 aa0.01□□□□□ -2.41
CXXC4-203ENST00000515509 RER1O15258 196 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 TRGC2P03986 189 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 FXYD6P3P58550 94 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 FOXI2Q6ZQN5 318 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 GPX7Q96SL4 187 aaPredicted RBP0□□□□□ -2.41
CXXC4-203ENST00000515509 PHB2Q99623 299 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 CCL19Q99731 98 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 LIMD2Q9BT23 127 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 OR2J1Q9GZK6 312 aa0□□□□□ -2.41
CXXC4-203ENST00000515509 MEGF8Q7Z7M0 2845 aa-0□□□□□ -2.41
CXXC4-203ENST00000515509 UHRF1BP1Q6BDS2 1440 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 TRAV5A0A0B4J249 113 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 G3V2T6 193 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 AIPO00170 330 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 IFNA4P05014 189 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 IDO1P14902 403 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 HSD11B1P28845 292 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 CAPZBP47756 277 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 GNG5P63218 68 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 MIR22HGQ0VDD5 57 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 SCGB2B2Q4G0G5 96 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 LINC00299Q6ZSB3 139 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 Q86TA4 180 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 PAIP2Q9BPZ3 127 aaKnown RBP-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 MAP1LC3BQ9GZQ8 125 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 SYNE2Q8WXH0 6885 aaKnown RBP-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 NUP210LQ5VU65 1888 aa-0.01□□□□□ -2.41
CXXC4-203ENST00000515509 A0A096LPI6 279 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 ODAMA1E959 279 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 TMEM210A6NLX4 147 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 H7C1C5 153 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 HIST1H2BKO60814 126 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 IFNA14P01570 189 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 HIST1H2BJP06899 126 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 OGNP20774 298 aaKnown RBP-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 RPL37AP61513 92 aaKnown RBP-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 LCN6P62502 163 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 MSMO1Q15800 293 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 DHRS4L2Q6PKH6 230 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 IFT20Q8IY31 132 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 RMND5BQ96G75 393 aaPredicted RBP-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 NABP2Q9BQ15 211 aa-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 BOKQ9UMX3 212 aaPredicted RBP-0.02□□□□□ -2.41
CXXC4-203ENST00000515509 CD109Q6YHK3 1445 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms