RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KCNIP2Q9NS61 270 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 CLEC5AQ9NY25 188 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
CLCN3-210ENST00000515420 IGHV4-28A0A0C4DH34 117 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 JTBO76095 146 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 AMBPP02760 352 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 DEFB1P60022 68 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 FGL1Q08830 312 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
CLCN3-210ENST00000515420 C11orf45Q8TAV5 145 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
CLCN3-210ENST00000515420 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF705FA8MVS1 300 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 F6UB75 175 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF705DP0CH99 300 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF705BP0CI00 300 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 PMS2P11Q13670 270 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 PSG3Q16557 428 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 GUK1Q16774 197 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 CEMP1Q6PRD7 247 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF738Q8NE65 137 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF331Q9NQX6 463 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 KLK5Q9Y337 293 aaPredicted RBP9.25□□□□□ -0.93
CLCN3-210ENST00000515420 HSPB11Q9Y547 144 aa9.25□□□□□ -0.93
CLCN3-210ENST00000515420 ZNF253O75346 499 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 IGKV3-20P01619 116 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 RBMY1A1P0DJD3 496 aaKnown RBP9.24□□□□□ -0.93
CLCN3-210ENST00000515420 RBMY1CP0DJD4 496 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
CLCN3-210ENST00000515420 CLINT1Q14677 625 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
CLCN3-210ENST00000515420 MORN5Q5VZ52 161 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 THAP6Q8TBB0 222 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 ASB13Q8WXK3 278 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 ATP5SQ99766 215 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 WDR61Q9GZS3 305 aaKnown RBP9.24□□□□□ -0.93
CLCN3-210ENST00000515420 SLC35B3Q9H1N7 401 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 TMEM14CQ9P0S9 112 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 RYR3Q15413 4870 aa9.24□□□□□ -0.93
CLCN3-210ENST00000515420 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 C17orf112F2Z3M2 114 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 RPL12P30050 165 aaKnown RBP9.23□□□□□ -0.93
CLCN3-210ENST00000515420 IGFL4Q6B9Z1 124 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 OR11H7Q8NGC8 314 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 PHLDA1Q8WV24 401 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-210ENST00000515420 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-210ENST00000515420 LYSTQ99698 3801 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-210ENST00000515420 MBD2Q9UBB5 411 aa9.23□□□□□ -0.93
CLCN3-210ENST00000515420 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
CLCN3-210ENST00000515420 C11orf94C9JXX5 98 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 DEFB4AO15263 64 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
CLCN3-210ENST00000515420 PDE6HQ13956 83 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 RPUSD4Q96CM3 377 aaKnown RBP9.22□□□□□ -0.93
CLCN3-210ENST00000515420 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 MRPL32Q9BYC8 188 aaKnown RBP9.22□□□□□ -0.93
CLCN3-210ENST00000515420 MED28Q9H204 178 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 GOLT1BQ9Y3E0 138 aa9.22□□□□□ -0.93
CLCN3-210ENST00000515420 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 H3BQ15 152 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 BOLA2-SMG1P6H3BVE0 249 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 SLC17A3O00476 420 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 IFNA5P01569 189 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 FXYD7P58549 80 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
CLCN3-210ENST00000515420 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.94
CLCN3-210ENST00000515420 RFNGQ9Y644 331 aa9.21□□□□□ -0.94
CLCN3-210ENST00000515420 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 TRAV5A0A0B4J249 113 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 INSP01308 110 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 HIST1H1EP10412 219 aaKnown RBP9.2□□□□□ -0.94
CLCN3-210ENST00000515420 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 TCTAP57738 103 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 RGS21Q2M5E4 152 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
CLCN3-210ENST00000515420 RYR2Q92736 4967 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 M0R2Z0 102 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 CRXO43186 299 aaPredicted RBP9.19□□□□□ -0.94
CLCN3-210ENST00000515420 HBE1P02100 147 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
CLCN3-210ENST00000515420 FCN2Q15485 313 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 TMEM256Q8N2U0 113 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 SCGB1C1Q8TD33 95 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 PRELID1Q9Y255 219 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
CLCN3-210ENST00000515420 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 TRAV10A0A0B4J240 114 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 CDKN1BP46527 198 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms