RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 Q6ZRG5 221 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 TMEM37Q8WXS4 190 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 UBE2L5PA0A1B0GUS4 154 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 MRPS12O15235 138 aaKnown RBP17.59■□□□□ 0.41
SNF8-213ENST00000514929 AMBPP02760 352 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 BAXQ07812 192 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 VWC2Q2TAL6 325 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 MIC13Q5XKP0 118 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 BPIFA4PQ86YQ2 179 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 C1orf158Q8N1D5 194 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 OR11H7Q8NGC8 314 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 IGF2BP2-AS1Q96M15 143 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 TMEM208Q9BTX3 173 aa17.59■□□□□ 0.41
SNF8-213ENST00000514929 INMT-MINDY4F8WBC2 141 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 PRAF2O60831 178 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 SIX6O95475 246 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 HBE1P02100 147 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 SPART-AS1P0CW21 52 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 PSG3Q16557 428 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 SPINK13Q1W4C9 94 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 LCN15Q6UWW0 184 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 DNAJC4Q9NNZ3 241 aa17.58■□□□□ 0.4
SNF8-213ENST00000514929 SNRPCP09234 159 aaKnown RBP17.57■□□□□ 0.4
SNF8-213ENST00000514929 CXCL2P19875 107 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 PRR20EP86478 221 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 PRR20CP86479 221 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 PRR20DP86480 221 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 PRR20BP86481 221 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 PRR20AP86496 221 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 HIST1H1AQ02539 215 aaPredicted RBP17.57■□□□□ 0.4
SNF8-213ENST00000514929 OR1L4Q8NGR5 311 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 APLNQ9ULZ1 77 aa17.57■□□□□ 0.4
SNF8-213ENST00000514929 DEFB131BA0A096LNP1 70 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 M0R2Z0 102 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 RLN2P04090 185 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 DEFA1P59665 94 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 DEFA3P59666 94 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 OPCMLQ14982 345 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 ATP6V1FQ16864 119 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 RRN3P1Q2M238 152 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 MORN5Q5VZ52 161 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 OR8A1Q8NGG7 326 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 PFDN5Q99471 154 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 SLC50A1Q9BRV3 221 aa17.56■□□□□ 0.4
SNF8-213ENST00000514929 LOC102723971A0A1B0GUV8 181 aa17.55■□□□□ 0.4
SNF8-213ENST00000514929 INSP01308 110 aa17.55■□□□□ 0.4
SNF8-213ENST00000514929 RHOBP62745 196 aa17.55■□□□□ 0.4
SNF8-213ENST00000514929 ZNF331Q9NQX6 463 aaPredicted RBP17.55■□□□□ 0.4
SNF8-213ENST00000514929 PPP1R14DQ9NXH3 145 aa17.55■□□□□ 0.4
SNF8-213ENST00000514929 IGHV4-4A0A075B6R2 117 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 FGF7P21781 194 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 RPL29P47914 159 aaKnown RBP17.54■□□□□ 0.4
SNF8-213ENST00000514929 B2MP61769 119 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 LRRC37A5PQ49AS3 106 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 RPP25LQ8N5L8 163 aaKnown RBP17.54■□□□□ 0.4
SNF8-213ENST00000514929 RPUSD4Q96CM3 377 aaKnown RBP17.54■□□□□ 0.4
SNF8-213ENST00000514929 NMES1Q9C002 83 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 BATF3Q9NR55 127 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 SLC39A9Q9NUM3 307 aa17.54■□□□□ 0.4
SNF8-213ENST00000514929 EPPK1P58107 5090 aaKnown RBP17.54■□□□□ 0.4
SNF8-213ENST00000514929 TEX48A0A1B0GUV7 120 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 H3BTX0 84 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 BOLA2-SMG1P6H3BVE0 249 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 PRB4P10163 310 aaPredicted RBP17.53■□□□□ 0.4
SNF8-213ENST00000514929 CYCSP99999 105 aaKnown RBP17.53■□□□□ 0.4
SNF8-213ENST00000514929 MARVELD1Q9BSK0 173 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 RNF126Q9BV68 326 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 SLC25A31Q9H0C2 315 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 PXMP4Q9Y6I8 212 aa17.53■□□□□ 0.4
SNF8-213ENST00000514929 E5RGE8 158 aa17.52■□□□□ 0.4
SNF8-213ENST00000514929 CRXO43186 299 aaPredicted RBP17.52■□□□□ 0.4
SNF8-213ENST00000514929 FAM222AQ5U5X8 452 aa17.52■□□□□ 0.4
SNF8-213ENST00000514929 BAP18Q8IXM2 172 aa17.52■□□□□ 0.4
SNF8-213ENST00000514929 DKK2Q9UBU2 259 aa17.52■□□□□ 0.4
SNF8-213ENST00000514929 YTHDF2Q9Y5A9 579 aaKnown RBP17.52■□□□□ 0.4
SNF8-213ENST00000514929 TRAV5A0A0B4J249 113 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 MPDU1O75352 247 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 IGLC2P0DOY2 106 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 NHLH2Q02577 135 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 CHAC2Q8WUX2 184 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 NIPSNAP3BQ9BS92 247 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 OR5AC2Q9NZP5 309 aa17.51■□□□□ 0.39
SNF8-213ENST00000514929 TRAV12-2A0A075B6T6 113 aa17.5■□□□□ 0.39
SNF8-213ENST00000514929 SLC17A3O00476 420 aa17.5■□□□□ 0.39
SNF8-213ENST00000514929 OR5C1Q8NGR4 320 aa17.5■□□□□ 0.39
SNF8-213ENST00000514929 H3BQ15 152 aa17.49■□□□□ 0.39
SNF8-213ENST00000514929 SSNA1O43805 119 aa17.49■□□□□ 0.39
SNF8-213ENST00000514929 GUK1Q16774 197 aa17.49■□□□□ 0.39
SNF8-213ENST00000514929 ZNF705GA8MUZ8 300 aaPredicted RBP17.48■□□□□ 0.39
SNF8-213ENST00000514929 THAP6Q8TBB0 222 aa17.48■□□□□ 0.39
SNF8-213ENST00000514929 NPCDR1Q9BY65 106 aa17.48■□□□□ 0.39
SNF8-213ENST00000514929 PLA2G2EQ9NZK7 142 aa17.48■□□□□ 0.39
SNF8-213ENST00000514929 H0YIZ8 118 aa17.47■□□□□ 0.39
SNF8-213ENST00000514929 H2BFSP57053 126 aa17.47■□□□□ 0.39
SNF8-213ENST00000514929 OR10J6PQ8NGY7 276 aa17.47■□□□□ 0.39
SNF8-213ENST00000514929 SAT2Q96F10 170 aaPredicted RBP17.47■□□□□ 0.39
SNF8-213ENST00000514929 NDUFAF3Q9BU61 184 aa17.47■□□□□ 0.39
SNF8-213ENST00000514929 PRM2P04554 102 aa17.46■□□□□ 0.39
SNF8-213ENST00000514929 CLINT1Q14677 625 aa17.46■□□□□ 0.39
SNF8-213ENST00000514929 PPP1R1CQ8WVI7 109 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms