RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 WFDC11Q8NEX6 87 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 CMTM2Q8TAZ6 248 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 ZNF492Q9P255 531 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 V9GYV3 84 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.38
RNF4-220ENST00000513578 K7EQM0 130 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 CD5LO43866 347 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 ELANEP08246 267 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 ARL3P36405 182 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
RNF4-220ENST00000513578 FAM3BP58499 235 aaPredicted RBP6.45□□□□□ -1.38
RNF4-220ENST00000513578 ERVFC1-1P60608 527 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 GNG5P63218 68 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 OR8I2Q8N0Y5 310 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 RNF152Q8N8N0 203 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 MYOZ3Q8TDC0 251 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 NOL4LQ96MY1 436 aaPredicted RBP6.45□□□□□ -1.38
RNF4-220ENST00000513578 METTL26Q96S19 204 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 NPFFR1Q9GZQ6 430 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 AAMDCQ9H7C9 122 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 CLEC5AQ9NY25 188 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 LINC00527Q9UJ94 153 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 ZFP30Q9Y2G7 519 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 SMAD5-AS1Q9Y6J3 95 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 URGCP-MRPS24S4R325 110 aa6.45□□□□□ -1.38
RNF4-220ENST00000513578 PDZD2O15018 2839 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 DIRC3C9JPN6 131 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 PPP5D1E7EU14 171 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 K7EMT4 169 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 PHOX2AO14813 284 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 IGLV2-11P01706 119 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 PF4V1P10720 104 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 RPL19P84098 196 aaKnown RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 FOXE3Q13461 319 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 COX19Q49B96 90 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 CT83Q5H943 113 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 IBA57Q5T440 356 aaKnown RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 C16orf54Q6UWD8 224 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 COX8CQ7Z4L0 72 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 TMEM183AQ8IXX5 376 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 CIARTQ8N365 385 aaPredicted RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 MRPL53Q96EL3 112 aaKnown RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 LINC00479Q96M42 142 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 C17orf77Q96MU5 243 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 SLC50A1Q9BRV3 221 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 KLK15Q9H2R5 256 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 ZNF702PQ9H963 129 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 GNB4Q9HAV0 340 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 AURKAIP1Q9NWT8 199 aaPredicted RBP6.44□□□□□ -1.38
RNF4-220ENST00000513578 TMEM160Q9NX00 188 aa6.44□□□□□ -1.38
RNF4-220ENST00000513578 TRAV34A0A0B4J273 112 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 ZNF320A2RRD8 509 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 RBAKDNA6NC62 111 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 C19orf71A6NCJ1 209 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 C5orf52A6NGY3 159 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 SLC17A3O00476 420 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 CSN1S1P47710 185 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 SLC35B1P78383 322 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 OR5I1Q13606 314 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 PSG3Q16557 428 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 RPEL1Q2QD12 228 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 Q86TA4 180 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 GPHB5Q86YW7 130 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 EXOC3-AS1Q8N2X6 119 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 OR4X2Q8NGF9 303 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
RNF4-220ENST00000513578 ZNF331Q9NQX6 463 aaPredicted RBP6.43□□□□□ -1.38
RNF4-220ENST00000513578 PEF1Q9UBV8 284 aaKnown RBP6.43□□□□□ -1.38
RNF4-220ENST00000513578 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 A0A1W2PS18 150 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 FAM231BA6NCW3 169 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 NPIPB6E9PJ23 425 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 H3BTX0 84 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
RNF4-220ENST00000513578 SNRPCP09234 159 aaKnown RBP6.42□□□□□ -1.38
RNF4-220ENST00000513578 MGST1P10620 155 aaKnown RBP6.42□□□□□ -1.38
RNF4-220ENST00000513578 HNF1AP20823 631 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 RPL15P61313 204 aaKnown RBP6.42□□□□□ -1.38
RNF4-220ENST00000513578 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 RASL11AQ6T310 242 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 GOLT1AQ6ZVE7 132 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 SIGLECL1Q8N7X8 197 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 OR4B1Q8NGF8 309 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 CELSR1Q9NYQ6 3014 aa6.42□□□□□ -1.38
RNF4-220ENST00000513578 ZNF785A8K8V0 405 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 UBE2CO00762 179 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 TRBV12-3P01733 135 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 TRGC2P03986 189 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 S100A6P06703 90 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 SAPCD1Q5SSQ6 148 aa6.41□□□□□ -1.38
RNF4-220ENST00000513578 WFDC12Q8WWY7 111 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms