RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MDFICQ9P1T7 246 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 CBY3A6NI87 242 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 IFNA5P01569 189 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 ATP5G1P05496 136 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 ID1P41134 155 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 ATP5G3P48201 142 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 BCAP31P51572 246 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 YPEL3P61236 119 aaPredicted RBP8.03□□□□□ -1.12
RNF4-216ENST00000511859 CYCSP99999 105 aaKnown RBP8.03□□□□□ -1.12
RNF4-216ENST00000511859 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 OR8G2PQ6IF36 304 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 LINC00052Q96N35 136 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 TMEM208Q9BTX3 173 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 OR5AC2Q9NZP5 309 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
RNF4-216ENST00000511859 U3KQ87 197 aa8.03□□□□□ -1.12
RNF4-216ENST00000511859 FAM24AA6NFZ4 105 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 H0YIZ8 118 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 LCE2BO14633 110 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 MPC2O95563 127 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
RNF4-216ENST00000511859 METTL15P1P0C7V9 234 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 CAV2P51636 162 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 B2MP61769 119 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 Q5BKY6 102 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 EBLN2Q6P2I7 272 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 Q6ZSN1 163 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 OR1S2Q8NGQ3 325 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 SMIM8Q96KF7 97 aa8.02□□□□□ -1.13
RNF4-216ENST00000511859 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 RLN2P04090 185 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
RNF4-216ENST00000511859 PVALBP20472 110 aaPredicted RBP8.01□□□□□ -1.13
RNF4-216ENST00000511859 DEFB1P60022 68 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 RAB11AP62491 216 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 RPP30P78346 268 aaKnown RBP8.01□□□□□ -1.13
RNF4-216ENST00000511859 ICAM4Q14773 271 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 IGF2BP2-AS1Q96M15 143 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 C11orf1Q9H5F2 150 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 MBD2Q9UBB5 411 aa8.01□□□□□ -1.13
RNF4-216ENST00000511859 IGSF23A1L1A6 192 aa8□□□□□ -1.13
RNF4-216ENST00000511859 TSC22D2O75157 780 aa8□□□□□ -1.13
RNF4-216ENST00000511859 CST7O76096 145 aa8□□□□□ -1.13
RNF4-216ENST00000511859 IL4P05112 153 aa8□□□□□ -1.13
RNF4-216ENST00000511859 IGLC1P0CG04 106 aa8□□□□□ -1.13
RNF4-216ENST00000511859 TSPOP30536 169 aa8□□□□□ -1.13
RNF4-216ENST00000511859 PSMB3P49720 205 aa8□□□□□ -1.13
RNF4-216ENST00000511859 RAP2BP61225 183 aa8□□□□□ -1.13
RNF4-216ENST00000511859 FAM78BQ5VT40 261 aa8□□□□□ -1.13
RNF4-216ENST00000511859 NOXA1Q86UR1 476 aa8□□□□□ -1.13
RNF4-216ENST00000511859 OR2T35Q8NGX2 323 aa8□□□□□ -1.13
RNF4-216ENST00000511859 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
RNF4-216ENST00000511859 ACY3Q96HD9 319 aa8□□□□□ -1.13
RNF4-216ENST00000511859 ZNF586Q9NXT0 402 aa8□□□□□ -1.13
RNF4-216ENST00000511859 PFDN2Q9UHV9 154 aa8□□□□□ -1.13
RNF4-216ENST00000511859 SMCO3A2RU48 225 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
RNF4-216ENST00000511859 OR10J1P30954 320 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 NUP62P37198 522 aaPredicted RBP7.99□□□□□ -1.13
RNF4-216ENST00000511859 RND2P52198 227 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 TAS2R30P59541 319 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 ARL16Q0P5N6 197 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 PRSS54Q6PEW0 395 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
RNF4-216ENST00000511859 THAP6Q8TBB0 222 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 LYRM2Q9NU23 88 aaPredicted RBP7.99□□□□□ -1.13
RNF4-216ENST00000511859 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
RNF4-216ENST00000511859 A0A0J9YX75 114 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 PMS2P5A8MQ11 134 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 ZNF705GA8MUZ8 300 aaPredicted RBP7.98□□□□□ -1.13
RNF4-216ENST00000511859 PRSS46E5RG02 174 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 E5RGE8 158 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 PET100P0DJ07 73 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 SLC25A4P12235 298 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 LINC00315P59091 139 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 NHLH2Q02577 135 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 ESRGQ1W209 222 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 ACOT7LQ6ZUV0 252 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 TMEM252Q8N6L7 170 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 NPIPB3Q92617 1050 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 GNPNAT1Q96EK6 184 aaPredicted RBP7.98□□□□□ -1.13
RNF4-216ENST00000511859 SLC35E1Q96K37 410 aa7.98□□□□□ -1.13
RNF4-216ENST00000511859 FXYD6-FXYD2A0A087WZ82 144 aa7.97□□□□□ -1.13
RNF4-216ENST00000511859 ISLRO14498 428 aa7.97□□□□□ -1.13
RNF4-216ENST00000511859 TOMM40O96008 361 aa7.97□□□□□ -1.13
RNF4-216ENST00000511859 PRM2P04554 102 aa7.97□□□□□ -1.13
RNF4-216ENST00000511859 FUSP35637 526 aaKnown RBP eCLIP7.97□□□□□ -1.133e-6■□□□□ 10.6
RNF4-216ENST00000511859 ATP5IP56385 69 aaPredicted RBP7.97□□□□□ -1.13
RNF4-216ENST00000511859 SLC38A11Q08AI6 406 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms