RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SLC17A3O00476 420 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRAF2O60831 178 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 FGF7P21781 194 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 S100A11P31949 105 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 H2BFSP57053 126 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 HBG1P69891 147 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 HBG2P69892 147 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRR20EP86478 221 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRR20CP86479 221 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRR20DP86480 221 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRR20BP86481 221 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PRR20AP86496 221 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 PXDC1Q5TGL8 231 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 THAP6Q8TBB0 222 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
RNF4-215ENST00000511843 EPPK1P58107 5090 aaKnown RBP9.55□□□□□ -0.88
RNF4-215ENST00000511843 IGLL5B9A064 214 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 PRM2P04554 102 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 DEFA1P59665 94 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 DEFA3P59666 94 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 B2MP61769 119 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
RNF4-215ENST00000511843 RAB31Q13636 194 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 PSG3Q16557 428 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 C12orf74Q32Q52 190 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 BAP18Q8IXM2 172 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 NMES1Q9C002 83 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
RNF4-215ENST00000511843 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 H3BQ15 152 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 SSNA1O43805 119 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 CLINT1Q14677 625 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 GCSAMLQ5JQS6 135 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 Q6ZRG5 221 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 OR5C1Q8NGR4 320 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 C2CD4CQ8TF44 421 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
RNF4-215ENST00000511843 NEU1Q99519 415 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
RNF4-215ENST00000511843 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 PXMP4Q9Y6I8 212 aa9.53□□□□□ -0.88
RNF4-215ENST00000511843 E5RGE8 158 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 CRXO43186 299 aaPredicted RBP9.52□□□□□ -0.89
RNF4-215ENST00000511843 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
RNF4-215ENST00000511843 RLN2P04090 185 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 IGLC2P0DOY2 106 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 RPL29P47914 159 aaKnown RBP9.52□□□□□ -0.89
RNF4-215ENST00000511843 RHOBP62745 196 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 ATP6V1FQ16864 119 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 LCN15Q6UWW0 184 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 OR8A1Q8NGG7 326 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 PLA2G2EQ9NZK7 142 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
RNF4-215ENST00000511843 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
RNF4-215ENST00000511843 PRAC2D3DTV9 90 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 BOLA2-SMG1P6H3BVE0 249 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 RPP25LQ8N5L8 163 aaKnown RBP9.51□□□□□ -0.89
RNF4-215ENST00000511843 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 PPP1R1CQ8WVI7 109 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 IGF2BP2-AS1Q96M15 143 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 TMEM208Q9BTX3 173 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 RNF126Q9BV68 326 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 NPCDR1Q9BY65 106 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 PARD6GQ9BYG4 376 aaPredicted RBP9.51□□□□□ -0.89
RNF4-215ENST00000511843 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
RNF4-215ENST00000511843 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 C11orf94C9JXX5 98 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 INSP01308 110 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 HBE1P02100 147 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 CXCL2P19875 107 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 SAT2Q96F10 170 aaPredicted RBP9.5□□□□□ -0.89
RNF4-215ENST00000511843 SLC50A1Q9BRV3 221 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 SLC25A31Q9H0C2 315 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
RNF4-215ENST00000511843 IGHV4-4A0A075B6R2 117 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 DEFB131BA0A096LNP1 70 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 MPC2O95563 127 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 PYYP10082 97 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 CYCSP99999 105 aaKnown RBP9.49□□□□□ -0.89
RNF4-215ENST00000511843 KIR3DS1Q14943 382 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 RRN3P1Q2M238 152 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 CHAC2Q8WUX2 184 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 PFDN5Q99471 154 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 PPP1R14DQ9NXH3 145 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 YTHDF2Q9Y5A9 579 aaKnown RBP9.49□□□□□ -0.89
RNF4-215ENST00000511843 ALG5Q9Y673 324 aa9.49□□□□□ -0.89
RNF4-215ENST00000511843 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms