RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 FMC1Q96HJ9 113 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 DERL1Q9BUN8 251 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 TRBV6-1A0A0K0K1D8 114 aa11.65□□□□□ -0.54
SCLT1-209ENST00000511426 A8MWP6 167 aa11.65□□□□□ -0.54
SCLT1-209ENST00000511426 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-209ENST00000511426 TCRAP04437 139 aa11.65□□□□□ -0.54
SCLT1-209ENST00000511426 ADIRFQ15847 76 aa11.65□□□□□ -0.54
SCLT1-209ENST00000511426 GLMPQ8WWB7 406 aa11.65□□□□□ -0.54
SCLT1-209ENST00000511426 CSN1S1P47710 185 aa11.65□□□□□ -0.55
SCLT1-209ENST00000511426 UNQ9165/PRO28630Q6UXU0 137 aa11.65□□□□□ -0.55
SCLT1-209ENST00000511426 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.55
SCLT1-209ENST00000511426 TRBV20OR9-2A0A075B6H5 130 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 IGHV7-4-1A0A0J9YVY3 117 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 ZNF785A8K8V0 405 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 TCF21O43680 179 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 UBE2G1P62253 170 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 CENPWQ5EE01 88 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 ISOC2Q96AB3 205 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 ZNF331Q9NQX6 463 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-209ENST00000511426 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
SCLT1-209ENST00000511426 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 SMAD5-AS1Q9Y6J3 95 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
SCLT1-209ENST00000511426 IGHV3OR16-8A0A075B7F1 116 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 CRLF1O75462 422 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 TMEM75Q8N9X5 138 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 SLC17A3O00476 420 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 RNF212Q495C1 297 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 C17orf77Q96MU5 243 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
SCLT1-209ENST00000511426 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 A0A1B0GUS0 222 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 LINC01619G3V211 115 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 BAGE2Q86Y30 109 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 CBLN2Q8IUK8 224 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 RHPN1-AS1Q9BWJ2 59 aa11.61□□□□□ -0.55
SCLT1-209ENST00000511426 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 A0A087WW49 117 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 H3BTX0 84 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 H7BYZ3 331 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 GCGP01275 180 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-209ENST00000511426 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
SCLT1-209ENST00000511426 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-209ENST00000511426 GNG5P63218 68 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 TCTEX1D4Q5JR98 221 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 SFRP2Q96HF1 295 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
SCLT1-209ENST00000511426 RBAKDNA6NC62 111 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 ISLRO14498 428 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 CHEK1O14757 476 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 ZNF207O43670 478 aaKnown RBP11.59□□□□□ -0.55
SCLT1-209ENST00000511426 LTAP01374 205 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 KLF5Q13887 457 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-209ENST00000511426 DPF1Q92782 380 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 PEMTQ9UBM1 199 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 TSSC4Q9Y5U2 329 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-209ENST00000511426 TMEM213A2RRL7 107 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 M0QZ24 198 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 PSG3Q16557 428 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 OSTCQ9NRP0 149 aa11.59□□□□□ -0.55
SCLT1-209ENST00000511426 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 ZFHX3Q15911 3703 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 IGLV2-8P01709 118 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 S100PP25815 95 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 Q86TA4 180 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 KLHL30-AS1Q8NEE0 82 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 RNF114Q9Y508 228 aa11.58□□□□□ -0.56
SCLT1-209ENST00000511426 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 K7EN84 100 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 PROK1P58294 105 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 FLI1Q01543 452 aaPredicted RBP11.57□□□□□ -0.56
SCLT1-209ENST00000511426 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 OR10G8Q8NGN5 311 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 MLXQ9UH92 298 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 RPH3ALQ9UNE2 315 aa11.57□□□□□ -0.56
SCLT1-209ENST00000511426 OTOGQ6ZRI0 2925 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms