RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 POU6F1Q14863 301 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 MSMO1Q15800 293 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 CROCCP2Q86T23 111 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 OR5AS1Q8N127 324 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 PSMF1Q92530 271 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 MALSU1Q96EH3 234 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 GPX7Q96SL4 187 aaPredicted RBP0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 GINS3Q9BRX5 216 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 WFDC10AQ9H1F0 79 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 GID8Q9NWU2 228 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 UBR2Q8IWV8 1755 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 MGAMO43451 1857 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 NUP210LQ5VU65 1888 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 CECR2Q9BXF3 1484 aa0.67□□□□□ -2.3
TRAPPC11-207ENST00000511409 UNC13CQ8NB66 2214 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 MYO18AQ92614 2054 aaKnown RBP0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 TRAV27A0A087WT01 109 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 PPYP01298 95 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 IGLV1-51P01701 117 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 TCTAP57738 103 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 TRIQKQ629K1 86 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 TMEM14EPQ6UXP3 125 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 GRINAQ7Z429 371 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 ARPINQ7Z6K5 226 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 STX12Q86Y82 276 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 STX19Q8N4C7 294 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 LAMTOR3Q9UHA4 124 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 UFC1Q9Y3C8 167 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 V9GYQ6 96 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 SIP14410 1827 aa0.66□□□□□ -2.3
TRAPPC11-207ENST00000511409 TRAV23DV6A0A075B6W5 121 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 A0A087WSZ3 146 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 hDV103S1A0JD37 113 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 TMEM238C9JI98 176 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 JMJD7-PLA2G4BH0Y9G9 81 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 PFDN1O60925 122 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 IGLV3-1P01715 115 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 G0S2P27469 103 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 TAS2R41P59536 307 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 GNG3P63215 75 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 EIF3IQ13347 325 aaKnown RBP0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 PPP1R2P3Q6NXS1 205 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 C3orf33Q6P1S2 294 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 KRTAP26-1Q6PEX3 210 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 SMIM20Q8N5G0 67 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 FAM24BQ8N5W8 94 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 DYDC1Q8WWB3 177 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 ZC2HC1AQ96GY0 325 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 PRRT1Q99946 306 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 SELENOSQ9BQE4 189 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 MED11Q9P086 117 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 PTPRFP10586 1907 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 MYLKQ15746 1914 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 FBN2P35556 2912 aa0.65□□□□□ -2.31
TRAPPC11-207ENST00000511409 A0A096LPI6 279 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 LYRM1O43325 122 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 IDO1P14902 403 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 GNG10P50151 68 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 CIRBPQ14011 172 aaKnown RBP0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 OR10AG1Q8NH19 301 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 NEK7Q8TDX7 302 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 BOLA2Q9H3K6 86 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 BIN3Q9NQY0 253 aa0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 N4BP2Q86UW6 1770 aaPredicted RBP0.64□□□□□ -2.31
TRAPPC11-207ENST00000511409 CAMSAP2Q08AD1 1489 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 ASCC3Q8N3C0 2202 aaKnown RBP0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 TRAV5A0A0B4J249 113 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 C9orf170A2RU37 121 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 PPP5D1E7EU14 171 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 C5orf67F2Z3F1 127 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 GPR31O00270 319 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 MFSD11O43934 449 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 PIAS1O75925 651 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 CSN2P05814 226 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 CRYBA4P53673 196 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 HBBP68871 147 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 SPATA45Q537H7 98 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 C1orf140Q5VVS0 124 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 DCUN1D2Q6PH85 259 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 LINC00575Q6W349 94 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 NUP35Q8NFH5 326 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 PCBD2Q9H0N5 130 aa0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 TCEAL2Q9H3H9 227 aaPredicted RBP0.63□□□□□ -2.31
TRAPPC11-207ENST00000511409 NCAPD3P42695 1498 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 MAP1LC3B2A6NCE7 125 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 CST7O76096 145 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 FABP1P07148 127 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 SERPINB1P30740 379 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 GLRXP35754 106 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 RTL8BQ17RB0 113 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 FKBP1CQ5VVH2 108 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 LYG2Q86SG7 212 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 FAM216BQ8N7L0 139 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 ISOC1Q96CN7 298 aa0.62□□□□□ -2.31
TRAPPC11-207ENST00000511409 HOPXQ9BPY8 73 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms