RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 SGK494Q96LW2 274 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 CD3EP07766 207 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 FGF6P10767 208 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 S100A7P31151 101 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 PLGLAQ15195 96 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 C2orf91Q6ZV80 131 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 FANCD2OSQ96PS1 177 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 DPM3Q9P2X0 92 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 RPH3ALQ9UNE2 315 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 NCOR1O75376 2440 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 OTOGLQ3ZCN5 2332 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 M0QZ24 198 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 IGLC6P0CF74 106 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 CEACAM3P40198 252 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 MPV17L2Q567V2 206 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 GFRALQ6UXV0 394 aa7.24□□□□□ -1.25
PDGFRA-208ENST00000509490 A0A087X0K7 114 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 hDV102S1A0JD36 115 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 PPBPP02775 128 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 MFAP4P55083 255 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 LDLRAD2Q5SZI1 272 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 ZNF562Q6V9R5 426 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 CT45A10P0DMU9 189 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 C5orf64Q2M2E5 130 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 TIMM23O14925 209 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 PRTN3P24158 256 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 ZNF575Q86XF7 245 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 ABHD17AQ96GS6 310 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 C17orf77Q96MU5 243 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 ARFGEF3Q5TH69 2177 aa7.23□□□□□ -1.25
PDGFRA-208ENST00000509490 MALRD1Q5VYJ5 2156 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 RBAKDNA6NC62 111 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 H3BTX0 84 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 KLK10O43240 276 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 NUDT3O95989 172 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 RPL7P18124 248 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 CD24P25063 80 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 GPR183P32249 361 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 IGHV3-21A0A0B4J1V1 117 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 TOX4O94842 621 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 IL4P05112 153 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 ZNF672Q499Z4 452 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 MINOS1Q5TGZ0 78 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 Q71RC1 249 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 LHFPL4Q7Z7J7 247 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 OR9G4Q8NGQ1 327 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 SIGLEC8Q9NYZ4 499 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 MINOS1-NBL1R4GNA1 71 aa7.22□□□□□ -1.25
PDGFRA-208ENST00000509490 TMEM189A5PLL7 270 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 SH2D1AO60880 128 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 SCGB2A1O75556 95 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 HLA-DRB4P13762 266 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 BMI1P35226 326 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 PRR25Q96S07 402 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.25
PDGFRA-208ENST00000509490 BDP1A6H8Y1 2624 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 RAB9AP51151 201 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 ARF6P62330 175 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 CCDC144NLQ6NUI1 221 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 ATP6V0BQ99437 205 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 ZNF318Q5VUA4 2279 aa7.21□□□□□ -1.26
PDGFRA-208ENST00000509490 IGHG4P01861 327 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 HBDP02042 147 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 LYZL1Q6UWQ5 148 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 PRELID3AQ96N28 172 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 ZMAT4Q9H898 229 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 THYN1Q9P016 225 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 PEF1Q9UBV8 284 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 CNIH1O95406 144 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 MRPL53Q96EL3 112 aaKnown RBP7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 C21orf62Q9NYP8 219 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 MUC21A0A0G2JKD1 596 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 MUC21A0A140T8X8 626 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 GNG7O60262 68 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 COX7A1P24310 79 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 ZNF138P52744 262 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 MUC21Q5SSG8 566 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 C11orf71Q6IPW1 123 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 ARPC1AQ92747 370 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 C8orf49Q96NF6 230 aa7.2□□□□□ -1.26
PDGFRA-208ENST00000509490 D6R8Y8 96 aa7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 H3BRM9 83 aa7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 NCR2O95944 276 aa7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 TMEM97Q5BJF2 176 aa7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 OR4C5Q8NGB2 326 aa7.19□□□□□ -1.26
PDGFRA-208ENST00000509490 OR4X2Q8NGF9 303 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms