RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 TMEM61Q8N0U2 210 aa10.9□□□□□ -0.66
HMGCL-208ENST00000509389 SLC25A2Q9BXI2 301 aa10.9□□□□□ -0.66
HMGCL-208ENST00000509389 SMDT1Q9H4I9 107 aa10.9□□□□□ -0.66
HMGCL-208ENST00000509389 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
HMGCL-208ENST00000509389 PLECQ15149 4684 aaKnown RBP10.9□□□□□ -0.66
HMGCL-208ENST00000509389 ZNF320A2RRD8 509 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 TMEM213A2RRL7 107 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 A8MWP6 167 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 CXorf1O96002 111 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 IL4P05112 153 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 C8orf88P0DMB2 117 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.67
HMGCL-208ENST00000509389 TAS2R45P59539 299 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.67
HMGCL-208ENST00000509389 FAM106AQ4KMX7 169 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 KHDC3LQ587J8 217 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 ZNF506Q5JVG8 444 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 LINC00305Q7Z4B0 112 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 Q8WTZ3 238 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 SHANK2-AS3Q9BTD1 123 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 DOK5Q9P104 306 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 MLXQ9UH92 298 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.67
HMGCL-208ENST00000509389 PUS1Q9Y606 427 aaKnown RBP eCLIP10.9□□□□□ -0.67
HMGCL-208ENST00000509389 HYDINQ4G0P3 5121 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGCL-208ENST00000509389 BCL2P10415 239 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 GCHFRP30047 84 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 TAGLN2P37802 199 aaKnown RBP10.89□□□□□ -0.67
HMGCL-208ENST00000509389 LYZP61626 148 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 GUK1Q16774 197 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 OR1B1Q8NGR6 318 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 UHRF2Q96PU4 802 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-208ENST00000509389 MANBALQ9NQG1 85 aa10.89□□□□□ -0.67
HMGCL-208ENST00000509389 NDUFA4O00483 81 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
HMGCL-208ENST00000509389 ORM2P19652 201 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 PPT1P50897 306 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
HMGCL-208ENST00000509389 TM4SF20Q53R12 229 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 U3KQE9 123 aa10.88□□□□□ -0.67
HMGCL-208ENST00000509389 RBFOX3A6NFN3 312 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 MRPS12O15235 138 aaKnown RBP10.87□□□□□ -0.67
HMGCL-208ENST00000509389 ICAM4Q14773 271 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 TOR2AQ5JU69 321 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 UNQ9165/PRO28630Q6UXU0 137 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 STXBP6Q8NFX7 210 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 FXYD5Q96DB9 178 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 TMEM167BQ9NRX6 74 aa10.87□□□□□ -0.67
HMGCL-208ENST00000509389 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
HMGCL-208ENST00000509389 A0A1B0GV50 99 aa10.86□□□□□ -0.67
HMGCL-208ENST00000509389 C9JQL5 133 aa10.86□□□□□ -0.67
HMGCL-208ENST00000509389 CRYBB3P26998 211 aa10.86□□□□□ -0.67
HMGCL-208ENST00000509389 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
HMGCL-208ENST00000509389 IGHV3-35A0A0C4DH35 117 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 ZNF98A6NK75 572 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 IFNA1P01562 189 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 RABAC1Q9UI14 185 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
HMGCL-208ENST00000509389 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
HMGCL-208ENST00000509389 LOC102724200A0A096LPH7 203 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-208ENST00000509389 TRAV25A0A0B4J276 109 aa10.84□□□□□ -0.67
HMGCL-208ENST00000509389 IGLC2P0DOY2 106 aa10.84□□□□□ -0.67
HMGCL-208ENST00000509389 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-208ENST00000509389 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
HMGCL-208ENST00000509389 UFC1Q9Y3C8 167 aa10.84□□□□□ -0.67
HMGCL-208ENST00000509389 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 FAM74A7A6NL05 159 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 BUB3O43684 328 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 OR7C2O60412 319 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 ADCYAP1P18509 176 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 S100A1P23297 94 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 S100A7P31151 101 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
HMGCL-208ENST00000509389 PEA15Q15121 130 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
HMGCL-208ENST00000509389 CCDC28AQ8IWP9 274 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 RARRES2Q99969 163 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 PAXXQ9BUH6 204 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 OR51M1Q9H341 326 aa10.83□□□□□ -0.68
HMGCL-208ENST00000509389 KRBOX1C9JBD0 128 aa10.82□□□□□ -0.68
HMGCL-208ENST00000509389 K7EMT4 169 aa10.82□□□□□ -0.68
HMGCL-208ENST00000509389 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
HMGCL-208ENST00000509389 PYYP10082 97 aa10.82□□□□□ -0.68
HMGCL-208ENST00000509389 C1orf194Q5T5A4 169 aa10.82□□□□□ -0.68
HMGCL-208ENST00000509389 TMEM231Q9H6L2 316 aa10.82□□□□□ -0.68
HMGCL-208ENST00000509389 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
HMGCL-208ENST00000509389 A0A087X0K7 114 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms