RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 RNF212Q495C1 297 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 BAP18Q8IXM2 172 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 LRRC20Q8TCA0 184 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
PDPN-208ENST00000509009 A6NHS1 94 aa8.83□□□□□ -1
PDPN-208ENST00000509009 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
PDPN-208ENST00000509009 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
PDPN-208ENST00000509009 TSPOP30536 169 aa8.83□□□□□ -1
PDPN-208ENST00000509009 RHOBP62745 196 aa8.83□□□□□ -1
PDPN-208ENST00000509009 HIST1H1AQ02539 215 aaPredicted RBP8.83□□□□□ -1
PDPN-208ENST00000509009 FCN2Q15485 313 aa8.83□□□□□ -1
PDPN-208ENST00000509009 PXDC1Q5TGL8 231 aa8.83□□□□□ -1
PDPN-208ENST00000509009 TMEM88Q6PEY1 159 aa8.83□□□□□ -1
PDPN-208ENST00000509009 Q6ZR54 194 aa8.83□□□□□ -1
PDPN-208ENST00000509009 LINC01587Q99440 93 aa8.83□□□□□ -1
PDPN-208ENST00000509009 RNF24Q9Y225 148 aa8.83□□□□□ -1
PDPN-208ENST00000509009 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
PDPN-208ENST00000509009 PRSS29PA6NIE9 313 aa8.82□□□□□ -1
PDPN-208ENST00000509009 LYRM9A8MSI8 78 aa8.82□□□□□ -1
PDPN-208ENST00000509009 CCSO14618 274 aa8.82□□□□□ -1
PDPN-208ENST00000509009 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
PDPN-208ENST00000509009 LINC00305Q7Z4B0 112 aa8.82□□□□□ -1
PDPN-208ENST00000509009 ZNF546Q86UE3 836 aa8.82□□□□□ -1
PDPN-208ENST00000509009 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
PDPN-208ENST00000509009 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
PDPN-208ENST00000509009 RPUSD4Q96CM3 377 aaKnown RBP8.82□□□□□ -1
PDPN-208ENST00000509009 MGST2Q99735 147 aa8.82□□□□□ -1
PDPN-208ENST00000509009 PPP1R14DQ9NXH3 145 aa8.82□□□□□ -1
PDPN-208ENST00000509009 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
PDPN-208ENST00000509009 L7N2F9 121 aa8.81□□□□□ -1
PDPN-208ENST00000509009 LYRM1O43325 122 aa8.81□□□□□ -1
PDPN-208ENST00000509009 TCRBP04435 133 aa8.81□□□□□ -1
PDPN-208ENST00000509009 DEFB130BP0DP73 79 aa8.81□□□□□ -1
PDPN-208ENST00000509009 DEFB130AP0DP74 79 aa8.81□□□□□ -1
PDPN-208ENST00000509009 VAMP2P63027 116 aa8.81□□□□□ -1
PDPN-208ENST00000509009 ZNF846Q147U1 533 aa8.81□□□□□ -1
PDPN-208ENST00000509009 C20orf85Q9H1P6 137 aa8.81□□□□□ -1
PDPN-208ENST00000509009 C11orf1Q9H5F2 150 aa8.81□□□□□ -1
PDPN-208ENST00000509009 DNAJC4Q9NNZ3 241 aa8.81□□□□□ -1
PDPN-208ENST00000509009 ZNF331Q9NQX6 463 aaPredicted RBP8.81□□□□□ -1
PDPN-208ENST00000509009 PKHD1P08F94 4074 aa8.8□□□□□ -1
PDPN-208ENST00000509009 TRAV6A0A075B6T7 132 aa8.8□□□□□ -1
PDPN-208ENST00000509009 CXCL2P19875 107 aa8.8□□□□□ -1
PDPN-208ENST00000509009 TAS2R60P59551 318 aa8.8□□□□□ -1
PDPN-208ENST00000509009 MORN5Q5VZ52 161 aa8.8□□□□□ -1
PDPN-208ENST00000509009 LCN15Q6UWW0 184 aa8.8□□□□□ -1
PDPN-208ENST00000509009 BPIFA4PQ86YQ2 179 aa8.8□□□□□ -1
PDPN-208ENST00000509009 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
PDPN-208ENST00000509009 ZNF431Q8TF32 576 aaPredicted RBP8.8□□□□□ -1
PDPN-208ENST00000509009 LSM5Q9Y4Y9 91 aaKnown RBP8.8□□□□□ -1
PDPN-208ENST00000509009 C5orf51A6NDU8 294 aa8.79□□□□□ -1
PDPN-208ENST00000509009 FAM24AA6NFZ4 105 aa8.79□□□□□ -1
PDPN-208ENST00000509009 CBY3A6NI87 242 aa8.79□□□□□ -1
PDPN-208ENST00000509009 FAM25EA8MYX2 175 aa8.79□□□□□ -1
PDPN-208ENST00000509009 PRAC2D3DTV9 90 aa8.79□□□□□ -1
PDPN-208ENST00000509009 H3BQ15 152 aa8.79□□□□□ -1
PDPN-208ENST00000509009 H3BTX0 84 aa8.79□□□□□ -1
PDPN-208ENST00000509009 COX7A2P2O60397 106 aa8.79□□□□□ -1
PDPN-208ENST00000509009 CST7O76096 145 aa8.79□□□□□ -1
PDPN-208ENST00000509009 HTN1P15515 57 aa8.79□□□□□ -1
PDPN-208ENST00000509009 CDKN1BP46527 198 aa8.79□□□□□ -1
PDPN-208ENST00000509009 CAMLGP49069 296 aa8.79□□□□□ -1
PDPN-208ENST00000509009 BCAP31P51572 246 aa8.79□□□□□ -1
PDPN-208ENST00000509009 KIR3DS1Q14943 382 aa8.79□□□□□ -1
PDPN-208ENST00000509009 OPCMLQ14982 345 aa8.79□□□□□ -1
PDPN-208ENST00000509009 C10orf113Q5VZT2 155 aa8.79□□□□□ -1
PDPN-208ENST00000509009 C12orf45Q8N5I9 185 aaPredicted RBP8.79□□□□□ -1
PDPN-208ENST00000509009 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
PDPN-208ENST00000509009 SAT2Q96F10 170 aaPredicted RBP8.79□□□□□ -1
PDPN-208ENST00000509009 C2orf50Q96LR7 162 aa8.79□□□□□ -1
PDPN-208ENST00000509009 SEC22CQ9BRL7 303 aa8.79□□□□□ -1
PDPN-208ENST00000509009 SLC50A1Q9BRV3 221 aa8.79□□□□□ -1
PDPN-208ENST00000509009 NDUFA13Q9P0J0 144 aa8.79□□□□□ -1
PDPN-208ENST00000509009 PKD1P98161 4303 aa8.79□□□□□ -1
PDPN-208ENST00000509009 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
PDPN-208ENST00000509009 F5H768 121 aa8.78□□□□□ -1
PDPN-208ENST00000509009 SLC17A3O00476 420 aa8.78□□□□□ -1
PDPN-208ENST00000509009 IGLC2P0DOY2 106 aa8.78□□□□□ -1
PDPN-208ENST00000509009 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
PDPN-208ENST00000509009 IL15RAQ13261 267 aa8.78□□□□□ -1
PDPN-208ENST00000509009 RAB31Q13636 194 aa8.78□□□□□ -1
PDPN-208ENST00000509009 MIC13Q5XKP0 118 aa8.78□□□□□ -1
PDPN-208ENST00000509009 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
PDPN-208ENST00000509009 Q6ZRG5 221 aa8.78□□□□□ -1
PDPN-208ENST00000509009 NRARPQ7Z6K4 114 aa8.78□□□□□ -1
PDPN-208ENST00000509009 WDR83OSQ9Y284 106 aa8.78□□□□□ -1
PDPN-208ENST00000509009 TIMM8BQ9Y5J9 83 aaPredicted RBP8.78□□□□□ -1
PDPN-208ENST00000509009 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
PDPN-208ENST00000509009 ATP5G1P05496 136 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 H2AFB2P0C5Z0 115 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 ATP5G3P48201 142 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 CAV2P51636 162 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 PARD6GQ9BYG4 376 aaPredicted RBP8.77□□□□□ -1.01
PDPN-208ENST00000509009 NUDT15Q9NV35 164 aa8.77□□□□□ -1.01
PDPN-208ENST00000509009 UQCC1Q9NVA1 299 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms