RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.65
RNF4-210ENST00000508235 M6PRP20645 277 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 TAS2R45P59539 299 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 ZNF345Q14585 488 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 DEFB135Q30KP9 77 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 HSD17B11Q8NBQ5 300 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 RNF183Q96D59 192 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
RNF4-210ENST00000508235 OVOL2Q9BRP0 275 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
RNF4-210ENST00000508235 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 RETNQ9HD89 108 aa11.02□□□□□ -0.65
RNF4-210ENST00000508235 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 A0A0J9YX75 114 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 HMSDA8MTL9 139 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 SMLR1H3BR10 107 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 JTBO76095 146 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
RNF4-210ENST00000508235 MBP02144 154 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
RNF4-210ENST00000508235 SERF2P84101 59 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 PDE6HQ13956 83 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 PSG3Q16557 428 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 KHDC3LQ587J8 217 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 MIR17HGQ75NE6 70 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 OR2G3Q8NGZ4 309 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
RNF4-210ENST00000508235 PRKDCP78527 4128 aaKnown RBP11.01□□□□□ -0.65
RNF4-210ENST00000508235 H3BQ15 152 aa11□□□□□ -0.65
RNF4-210ENST00000508235 ATP6V0CP27449 155 aa11□□□□□ -0.65
RNF4-210ENST00000508235 PSG9Q00887 426 aa11□□□□□ -0.65
RNF4-210ENST00000508235 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
RNF4-210ENST00000508235 OR51M1Q9H341 326 aa11□□□□□ -0.65
RNF4-210ENST00000508235 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
RNF4-210ENST00000508235 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 A0A0D9SG52 128 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 OR7C2O60412 319 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 IGFL4Q6B9Z1 124 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 RPL7L1Q6DKI1 246 aaKnown RBP10.99□□□□□ -0.65
RNF4-210ENST00000508235 OR10G4Q8NGN3 311 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 OR10G9Q8NGN4 311 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 OR10G7Q8NGN6 311 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 SAT2Q96F10 170 aaPredicted RBP10.99□□□□□ -0.65
RNF4-210ENST00000508235 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 ARPC5LQ9BPX5 153 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 PAXXQ9BUH6 204 aa10.99□□□□□ -0.65
RNF4-210ENST00000508235 TGP01266 2768 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 F6UB75 175 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
RNF4-210ENST00000508235 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 PYYP10082 97 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 KCNRGQ8N5I3 272 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 RPUSD4Q96CM3 377 aaKnown RBP10.98□□□□□ -0.65
RNF4-210ENST00000508235 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 PRELID1Q9Y255 219 aa10.98□□□□□ -0.65
RNF4-210ENST00000508235 H3BTX0 84 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 SLC17A3O00476 420 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 IGKV3-20P01619 116 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 C4BPBP20851 252 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 DEFB1P60022 68 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 OR11H4Q8NGC9 324 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 OR8A1Q8NGG7 326 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 RNF141Q8WVD5 230 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 MRPL53Q96EL3 112 aaKnown RBP10.97□□□□□ -0.65
RNF4-210ENST00000508235 ST6GAL2Q96JF0 529 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 RFNGQ9Y644 331 aa10.97□□□□□ -0.65
RNF4-210ENST00000508235 KANTRA0A1W2PQU2 76 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 A8MTW9 85 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 AMBPP02760 352 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 GIG44P09565 113 aaPredicted RBP10.96□□□□□ -0.65
RNF4-210ENST00000508235 OR10J4P0C629 311 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 HLA-DMBP28068 263 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
RNF4-210ENST00000508235 CNN1P51911 297 aaKnown RBP10.96□□□□□ -0.65
RNF4-210ENST00000508235 RAB2AP61019 212 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
RNF4-210ENST00000508235 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 OR11H2Q8NH07 326 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 RARRES2Q99969 163 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 EDA2RQ9HAV5 297 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.65
RNF4-210ENST00000508235 hCG_2014768A0A024R1R8 64 aa10.95□□□□□ -0.66
RNF4-210ENST00000508235 EIF5AP63241 154 aaKnown RBP10.95□□□□□ -0.66
RNF4-210ENST00000508235 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
RNF4-210ENST00000508235 AKAP14Q86UN6 197 aa10.95□□□□□ -0.66
RNF4-210ENST00000508235 LYPD1Q8N2G4 141 aa10.95□□□□□ -0.66
RNF4-210ENST00000508235 SH3BGRL3Q9H299 93 aa10.95□□□□□ -0.66
RNF4-210ENST00000508235 COL7A1Q02388 2944 aa10.95□□□□□ -0.66
RNF4-210ENST00000508235 NDUFB4O95168 129 aa10.94□□□□□ -0.66
RNF4-210ENST00000508235 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
RNF4-210ENST00000508235 IL17DQ8TAD2 202 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms