RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 DEFB119Q8N690 84 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 Q8N814 137 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 THEM6Q8WUY1 208 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 RAB37Q96AX2 223 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 ISOC1Q96CN7 298 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 OR2H1Q9GZK4 316 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 TAS2R7Q9NYW3 318 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 TRAPPC2LQ9UL33 140 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 SOX21Q9Y651 276 aaPredicted RBP1.22□□□□□ -2.21
SMN1-206ENST00000507905 SNURFQ9Y675 71 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 CAMSAP2Q08AD1 1489 aa1.22□□□□□ -2.21
SMN1-206ENST00000507905 IGKV3-7A0A075B6H7 116 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 TRAV10A0A0B4J240 114 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 TRAV5A0A0B4J249 113 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 OR2T8A6NH00 312 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 ZNF736B4DX44 427 aaPredicted RBP1.21□□□□□ -2.22
SMN1-206ENST00000507905 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 PFDN1O60925 122 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 IFNA4P05014 189 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 BCL2P10415 239 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 FABP2P12104 132 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 RPL35P42766 123 aaKnown RBP1.21□□□□□ -2.22
SMN1-206ENST00000507905 RAB5CP51148 216 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 DSCR4P56555 118 aaPredicted RBP1.21□□□□□ -2.22
SMN1-206ENST00000507905 EIF3IQ13347 325 aaKnown RBP1.21□□□□□ -2.22
SMN1-206ENST00000507905 C4orf22Q6V702 233 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 TAF9BQ9HBM6 251 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 LAMTOR2Q9Y2Q5 125 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 EXPH5Q8NEV8 1989 aa1.21□□□□□ -2.22
SMN1-206ENST00000507905 IGKV2-40A0A087WW87 121 aaPredicted RBP1.2□□□□□ -2.22
SMN1-206ENST00000507905 PRORSD1PA6NEY8 169 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 E7EUB6 86 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 TSTD3H0UI37 97 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 IGKV2D-40P01614 121 aaPredicted RBP1.2□□□□□ -2.22
SMN1-206ENST00000507905 MT-ND6P03923 174 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 POLR2HP52434 150 aaKnown RBP1.2□□□□□ -2.22
SMN1-206ENST00000507905 TMEM14EPQ6UXP3 125 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 Q8TAT8 98 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 C10orf105Q8TEF2 133 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 HYLS1Q96M11 299 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 CCDC115Q96NT0 180 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 RASL12Q9NYN1 266 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 MED31Q9Y3C7 131 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 ANKRD30AQ9BXX3 1397 aa1.2□□□□□ -2.22
SMN1-206ENST00000507905 A0A087WX48 190 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 KPNA4O00629 521 aaPredicted RBP1.19□□□□□ -2.22
SMN1-206ENST00000507905 CCL16O15467 120 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 NBEAP1P0C6P0 100 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 SDC2P34741 201 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 TEX29Q8N6K0 151 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 FAM216BQ8N7L0 139 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 TP53RKQ96S44 253 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 NIT2Q9NQR4 276 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 ZFP30Q9Y2G7 519 aa1.19□□□□□ -2.22
SMN1-206ENST00000507905 MGAMO43451 1857 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 HEATR1Q9H583 2144 aaKnown RBP1.18□□□□□ -2.22
SMN1-206ENST00000507905 TNRC6BQ9UPQ9 1833 aaKnown RBP1.18□□□□□ -2.22
SMN1-206ENST00000507905 GEMIN2O14893 280 aaKnown RBP1.18□□□□□ -2.22
SMN1-206ENST00000507905 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 RPS3P23396 243 aaKnown RBP eCLIP1.18□□□□□ -2.22
SMN1-206ENST00000507905 FAM74A1Q5RGS3 127 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 C2orf82Q6UX34 121 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 TOMM20LQ6UXN7 152 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 ZNF833PQ6ZTB9 187 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 TMEM35BQ8NCS4 154 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 OR9Q1Q8NGQ5 310 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 C4orf3Q8WVX3 66 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 PATE1Q8WXA2 126 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 MUCL1Q96DR8 90 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 OBSCN-AS1Q96MR7 158 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 GINS2Q9Y248 185 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 ADGBQ8N7X0 1667 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 LAMB4A4D0S4 1761 aa1.18□□□□□ -2.22
SMN1-206ENST00000507905 NUP210Q8TEM1 1887 aaPredicted RBP1.18□□□□□ -2.22
SMN1-206ENST00000507905 RP1L1Q8IWN7 2480 aaPredicted RBP1.17□□□□□ -2.22
SMN1-206ENST00000507905 LOC110117498A0A087WWA1 95 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 TRBV6-7A0A0A0MS04 114 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 IGHV1-58A0A0C4DH39 117 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 hDV103S1A0JD37 113 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 C5orf67F2Z3F1 127 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 FAM107AO95990 144 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 DNAL4O96015 105 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 ZNF25P17030 456 aaPredicted RBP1.17□□□□□ -2.22
SMN1-206ENST00000507905 LINC00305Q7Z4B0 112 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 LRRC18Q8N456 261 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 OR5H6Q8NGV6 325 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 ANP32BQ92688 251 aaKnown RBP1.17□□□□□ -2.22
SMN1-206ENST00000507905 BORCS5Q969J3 196 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 TCEAL2Q9H3H9 227 aaPredicted RBP1.17□□□□□ -2.22
SMN1-206ENST00000507905 RTL9Q8NET4 1388 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 NCAPD3P42695 1498 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 POLEQ07864 2286 aa1.17□□□□□ -2.22
SMN1-206ENST00000507905 BCL9O00512 1426 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 TRAPPC8Q9Y2L5 1435 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 PLXNA4Q9HCM2 1894 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 A0A087WSZ3 146 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 TRAV27A0A087WT01 109 aa1.16□□□□□ -2.22
SMN1-206ENST00000507905 C9orf170A2RU37 121 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms