RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
HMGCS1-204ENST00000507293 MUC4Q99102 2169 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 NAP1L6A6NFF2 107 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 CENPXA8MT69 81 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 ANXA7P20073 488 aaKnown RBP8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 PSG3Q16557 428 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 BAK1Q16611 211 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 PATE2Q6UY27 113 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 ZNF575Q86XF7 245 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 LRRC20Q8TCA0 184 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 LINC01587Q99440 93 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 ATG101Q9BSB4 218 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 ARL6Q9H0F7 186 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
HMGCS1-204ENST00000507293 FNDC10F2Z333 226 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 F5H768 121 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 K7EPK0 472 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 MRPS12O15235 138 aaKnown RBP8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 TSC22D2O75157 780 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 FAM3BP58499 235 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 TAS2R60P59551 318 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 IAH1Q2TAA2 248 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 C4orf46Q504U0 113 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 S100A7AQ86SG5 101 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 ZNF546Q86UE3 836 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 TMEM256Q8N2U0 113 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 ZBTB8BQ8NAP8 495 aaPredicted RBP8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 RPUSD4Q96CM3 377 aaKnown RBP8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 NPVFQ9HCQ7 196 aa8.11□□□□□ -1.11
HMGCS1-204ENST00000507293 NUDT3O95989 172 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 ATP5G1P05496 136 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 SNRPCP09234 159 aaKnown RBP8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 HTN1P15515 57 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 CXCL2P19875 107 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 BTCP35070 178 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 ATP5G3P48201 142 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 ARL16Q0P5N6 197 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 RNF24Q9Y225 148 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 RCL1Q9Y2P8 373 aaKnown RBP8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 PKD1P98161 4303 aa8.1□□□□□ -1.11
HMGCS1-204ENST00000507293 PKHD1P08F94 4074 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 GOSR2O14653 212 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 AGPAT2O15120 278 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 IL7P13232 177 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 CDKN1BP46527 198 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 TAS2R30P59541 319 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 PXDC1Q5TGL8 231 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 LCN15Q6UWW0 184 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 ZNRF2Q8NHG8 242 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 SDHCQ99643 169 aaPredicted RBP8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 SLC50A1Q9BRV3 221 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 CCDC32Q9BV29 185 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 GSKIPQ9P0R6 139 aa8.09□□□□□ -1.11
HMGCS1-204ENST00000507293 NBDYA0A0U1RRE5 68 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 CBY3A6NI87 242 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 H3BTX0 84 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 SLC17A3O00476 420 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 CCSO14618 274 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 COX7A2P2O60397 106 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 ZNF846Q147U1 533 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 KIR3DS1Q14943 382 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 MITD1Q8WV92 249 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 RNF141Q8WVD5 230 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 MGST2Q99735 147 aa8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 NOP10Q9NPE3 64 aaKnown RBP8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
HMGCS1-204ENST00000507293 C7orf66A4D0T2 115 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 H7BYZ3 331 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 CCL18P55774 89 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 TNP2Q05952 138 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 OPCMLQ14982 345 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 ZNF493Q6ZR52 646 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 BPIFA4PQ86YQ2 179 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 TMEM263Q8WUH6 116 aaKnown RBP8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 TMEM37Q8WXS4 190 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 C20orf144Q9BQM9 153 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 GGACTQ9BVM4 153 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 LINC00588Q9Y4M8 146 aa8.07□□□□□ -1.12
HMGCS1-204ENST00000507293 L7N2F9 121 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 VAMP2P63027 116 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 CLINT1Q14677 625 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 GFI1BQ5VTD9 330 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 C20orf85Q9H1P6 137 aa8.06□□□□□ -1.12
HMGCS1-204ENST00000507293 LSM5Q9Y4Y9 91 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms