RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 OR5C1Q8NGR4 320 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 THAP6Q8TBB0 222 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 DCANP1Q8TF63 244 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 RCHY1Q96PM5 261 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 GGTLC1Q9BX51 225 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 SLC25A31Q9H0C2 315 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 MBD2Q9UBB5 411 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 U3KQK5 164 aa6.99□□□□□ -1.29
CLCN3-205ENST00000506924 KNCNA6PVL3 124 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 PRYO14603 147 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 CFDP00746 253 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-205ENST00000506924 SNRPCP09234 159 aaKnown RBP6.98□□□□□ -1.29
CLCN3-205ENST00000506924 FGF7P21781 194 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 AP2S1P53680 142 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-205ENST00000506924 DEFB1P60022 68 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 SELENOTP62341 195 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 VWC2Q2TAL6 325 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 Q5BKY6 102 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 PSMG4Q5JS54 123 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 ZNF546Q86UE3 836 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 TM2D3Q9BRN9 247 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 RSG1Q9BU20 258 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-205ENST00000506924 SMIM3Q9BZL3 60 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 HIGD1AQ9Y241 93 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 WDR83OSQ9Y284 106 aa6.98□□□□□ -1.29
CLCN3-205ENST00000506924 TRAV2A0A0B4J234 112 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 H3BRN7 92 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 COX7A2P2O60397 106 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 PET100P0DJ07 73 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 PRB4P10163 310 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-205ENST00000506924 RPL12P30050 165 aaKnown RBP6.97□□□□□ -1.29
CLCN3-205ENST00000506924 NUP62P37198 522 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-205ENST00000506924 CMC4P56277 68 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-205ENST00000506924 FGL1Q08830 312 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 RAB31Q13636 194 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 ACTL10Q5JWF8 245 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 C1orf194Q5T5A4 169 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 LINC00052Q96N35 136 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 SHANK2-AS3Q9BTD1 123 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 FBXL17Q9UF56 701 aa6.97□□□□□ -1.29
CLCN3-205ENST00000506924 PLP1P60201 277 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 MORN5Q5VZ52 161 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 LINC00305Q7Z4B0 112 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 TMEM37Q8WXS4 190 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 HSPB11Q9Y547 144 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 AGRNO00468 2067 aa6.96□□□□□ -1.3
CLCN3-205ENST00000506924 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 H3BTX0 84 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 GALR1P47211 349 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 APOC4P55056 127 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 B2MP61769 119 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 SNRPD3P62318 126 aaKnown RBP6.95□□□□□ -1.3
CLCN3-205ENST00000506924 OPCMLQ14982 345 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 DEFB135Q30KP9 77 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 GCSAMLQ5JQS6 135 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 C10orf113Q5VZT2 155 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 DGAT2L7PQ6IED9 249 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 Q6ZRG5 221 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 STHQ8IWL8 128 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 ATP5SQ99766 215 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 WFDC1Q9HC57 220 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 DNAJC4Q9NNZ3 241 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 RFNGQ9Y644 331 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
CLCN3-205ENST00000506924 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 F6UB75 175 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 SMLR1H3BR10 107 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 SOCS3O14543 225 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 GIPP09681 153 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-205ENST00000506924 LYL1P12980 280 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 RPL29P47914 159 aaKnown RBP6.94□□□□□ -1.3
CLCN3-205ENST00000506924 GDF5OSQ5U4N7 250 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 OVOL2Q9BRP0 275 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 WDR61Q9GZS3 305 aaKnown RBP6.94□□□□□ -1.3
CLCN3-205ENST00000506924 CSTL1Q9H114 145 aa6.94□□□□□ -1.3
CLCN3-205ENST00000506924 HUWE1Q7Z6Z7 4374 aaKnown RBP6.93□□□□□ -1.3
CLCN3-205ENST00000506924 FXYD6-FXYD2A0A087WZ82 144 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-205ENST00000506924 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
CLCN3-205ENST00000506924 S100A7P31151 101 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 ID1P41134 155 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 PCP4P48539 62 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 FXYD7P58549 80 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 PXDC1Q5TGL8 231 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 SPATA31B1PQ5VZV4 182 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 TRPT1Q86TN4 253 aaKnown RBP6.93□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF709Q8N972 641 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms