RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 LRRC20Q8TCA0 184 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 CHAC2Q8WUX2 184 aa9.58□□□□□ -0.88
TCOF1-209ENST00000506630 WDR61Q9GZS3 305 aaKnown RBP9.58□□□□□ -0.88
TCOF1-209ENST00000506630 A0A087X0K7 114 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 F6UB75 175 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
TCOF1-209ENST00000506630 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
TCOF1-209ENST00000506630 NUTF2P61970 127 aaKnown RBP9.57□□□□□ -0.88
TCOF1-209ENST00000506630 TMEM41BQ5BJD5 291 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 OR4B1Q8NGF8 309 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 OR11H2Q8NH07 326 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 RARRES2Q99969 163 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 KCNIP2Q9NS61 270 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 CLEC5AQ9NY25 188 aa9.57□□□□□ -0.88
TCOF1-209ENST00000506630 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 TRAV5A0A0B4J249 113 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 C17orf112F2Z3M2 114 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 LY6G6CO95867 125 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 IFNA5P01569 189 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-209ENST00000506630 GIPP09681 153 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-209ENST00000506630 SPATA31B1PQ5VZV4 182 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 LCN15Q6UWW0 184 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 ZNF738Q8NE65 137 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 LINC00476Q8WZB0 136 aa9.56□□□□□ -0.88
TCOF1-209ENST00000506630 A0A0J9YX75 114 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 H3BTX0 84 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 CXCL2P19875 107 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 FXYD7P58549 80 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 GCSAMLQ5JQS6 135 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 SCGB1C1Q8TD33 95 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 ASB13Q8WXK3 278 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 SLC50A1Q9BRV3 221 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 C1QTNF4Q9BXJ3 329 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 XCL2Q9UBD3 114 aa9.55□□□□□ -0.88
TCOF1-209ENST00000506630 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
TCOF1-209ENST00000506630 SLC17A3O00476 420 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-209ENST00000506630 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-209ENST00000506630 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-209ENST00000506630 PSG9Q00887 426 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 PSG3Q16557 428 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 Q5BKY6 102 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 OR2T35Q8NGX2 323 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 MFFQ9GZY8 342 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 SLC35B3Q9H1N7 401 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 HRH4Q9H3N8 390 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 WFDC1Q9HC57 220 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-209ENST00000506630 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
TCOF1-209ENST00000506630 FXYD6-FXYD2A0A087WZ82 144 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 H3BQ15 152 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 DEFB4AO15263 64 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
TCOF1-209ENST00000506630 PYYP10082 97 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 CNN1P51911 297 aaKnown RBP9.52□□□□□ -0.89
TCOF1-209ENST00000506630 HIST1H1AQ02539 215 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-209ENST00000506630 FFAR4Q5NUL3 377 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 MIR17HGQ75NE6 70 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
TCOF1-209ENST00000506630 MRPL32Q9BYC8 188 aaKnown RBP9.52□□□□□ -0.89
TCOF1-209ENST00000506630 PARD6GQ9BYG4 376 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF705EA8MWA4 302 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-209ENST00000506630 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF266Q14584 549 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 GUK1Q16774 197 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 RPUSD4Q96CM3 377 aaKnown RBP9.51□□□□□ -0.89
TCOF1-209ENST00000506630 AQP10Q96PS8 301 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 FUT9Q9Y231 359 aa9.51□□□□□ -0.89
TCOF1-209ENST00000506630 ALMS1Q8TCU4 4167 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 IGHV3OR16-12A0A075B7B8 117 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 CXorf65A6NEN9 183 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 A8MTW9 85 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 ZNF705FA8MVS1 300 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-209ENST00000506630 HIST1H1EP10412 219 aaKnown RBP9.5□□□□□ -0.89
TCOF1-209ENST00000506630 MIFP14174 115 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 RHOBP62745 196 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 Q8NAQ8 132 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 INO80EQ8NBZ0 244 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-209ENST00000506630 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 SAT2Q96F10 170 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-209ENST00000506630 PPP1R14DQ9NXH3 145 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 X6R8D5 127 aa9.5□□□□□ -0.89
TCOF1-209ENST00000506630 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 OR7C2O60412 319 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 AMTNQ6UX39 209 aa9.49□□□□□ -0.89
TCOF1-209ENST00000506630 HSD17B11Q8NBQ5 300 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms