RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C5orf56Q8N8D9 126 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 LINC00476Q8WZB0 136 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 FBXL15Q9H469 300 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 SIRT7Q9NRC8 400 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 FUT9Q9Y231 359 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 INSIG2Q9Y5U4 225 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 ANKRD17O75179 2603 aaKnown RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 NDUFB3O43676 98 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 MPDU1O75352 247 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 SNAPINO95295 136 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 CTSGP08311 255 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 APELAP0DMC3 54 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 STX12Q86Y82 276 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 ZNF491Q8N8L2 437 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 FLYWCH2Q96CP2 140 aaKnown RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 ADTRPQ96IZ2 230 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 CLEC7AQ9BXN2 247 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 RETNQ9HD89 108 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 AURKAIP1Q9NWT8 199 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 PRNDQ9UKY0 176 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 CORTO00230 105 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 USF1P22415 310 aaPredicted RBP4.47□□□□□ -1.69
SCLT1-207ENST00000506233 ARF6P62330 175 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 SLC16A13Q7RTY0 426 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 FAM103A1Q9BTL3 118 aaKnown RBP4.47□□□□□ -1.69
SCLT1-207ENST00000506233 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 ARL2-SNX15V9GYD0 113 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 MYO18BQ8IUG5 2567 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 UNC79Q9P2D8 2635 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 TRAV8-2A0A0B4J237 113 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 H7C2Y5 167 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 SOCS3O14543 225 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 GCGP01275 180 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 FAM122CQ6P4D5 195 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 C16orf82Q7Z2V1 217 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 OR1P1Q8NH06 330 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 OR4X1Q8NH49 305 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 CIB3Q96Q77 187 aaPredicted RBP4.47□□□□□ -1.69
SCLT1-207ENST00000506233 PRELID3BQ9Y3B1 194 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 PUS1Q9Y606 427 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCLT1-207ENST00000506233 COL6A6A6NMZ7 2263 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 A0A1B0GXF2 115 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 B2MP61769 119 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 OR5I1Q13606 314 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 PEA15Q15121 130 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 LRRC10Q5BKY1 277 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 LEMD1Q68G75 181 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
SCLT1-207ENST00000506233 KCNIP2Q9NS61 270 aa4.47□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 SMIM27A0A1W2PRY6 76 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 HOXA5P20719 270 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 OR10J1P30954 320 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 EFNA4P52798 201 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 HBG1P69891 147 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 HBG2P69892 147 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 PYY3Q5JQD4 70 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 TRGV9Q99603 122 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 METTL1Q9UBP6 276 aaKnown RBP4.46□□□□□ -1.7
SCLT1-207ENST00000506233 A0A087WZ39 114 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 C9JCJ5 164 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 MOSP00540 346 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 LTAP01374 205 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 TRGC2P03986 189 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 YPEL3P61236 119 aaPredicted RBP4.46□□□□□ -1.7
SCLT1-207ENST00000506233 TLE4Q04727 773 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 TIGITQ495A1 244 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 MYOZ3Q8TDC0 251 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 SRSF12Q8WXF0 261 aaKnown RBP4.46□□□□□ -1.7
SCLT1-207ENST00000506233 EIF5A2Q9GZV4 153 aaKnown RBP4.46□□□□□ -1.7
SCLT1-207ENST00000506233 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
SCLT1-207ENST00000506233 ATP5LO75964 103 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 NDUFB8O95169 186 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 CD99P14209 185 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 RNF5Q99942 180 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 CEBPZOSA8MTT3 80 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 C11orf94C9JXX5 98 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 H3BRN7 92 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 PSG1P11464 419 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 IL3RAP26951 378 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 RPL35P42766 123 aaKnown RBP4.45□□□□□ -1.7
SCLT1-207ENST00000506233 UBE2E1P51965 193 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 C5orf64Q2M2E5 130 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 C10orf99Q6UWK7 81 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 CIARTQ8N365 385 aaPredicted RBP4.45□□□□□ -1.7
SCLT1-207ENST00000506233 BAALCQ8WXS3 180 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 H1FXQ92522 213 aaKnown RBP4.45□□□□□ -1.7
SCLT1-207ENST00000506233 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 IGHV3-21A0A0B4J1V1 117 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 MDFIC2A0A1B0GVS7 189 aa4.45□□□□□ -1.7
SCLT1-207ENST00000506233 A0A1W2PRD5 423 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms