RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	SNRPC	P09234	159 aa	Known RBP	4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	HTN1	P15515	57 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	HOXA5	P20719	270 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	TSPO	P30536	169 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	FUS	P35637	526 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	MEOX2	P50222	304 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	ATP5I	P56385	69 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	FGL1	Q08830	312 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	GGNBP1	Q5YKI7	109 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	ACOT7L	Q6ZUV0	252 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	SSX7	Q7RTT5	188 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	TMED4	Q7Z7H5	227 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	OR4D5	Q8NGN0	318 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	OR1B1	Q8NGR6	318 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	DYNC2LI1	Q8TCX1	351 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	LINC01587	Q99440	93 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	SHANK2-AS3	Q9BTD1	123 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	SCRT2	Q9NQ03	307 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	CACFD1	Q9UGQ2	172 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	DNAH5	Q8TE73	4624 aa		4.06	□□□□□ -1.76
GYPB-205	ENST00000505583	CBY3	A6NI87	242 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	PMS2P5	A8MQ11	134 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	PRAC2	D3DTV9	90 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	MRPS12	O15235	138 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	SYNGR2	O43760	224 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	DUSP14	O95147	198 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	PLA2G1B	P04054	148 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	ATP5G1	P05496	136 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	HOXB5	P09067	269 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	CXCL3	P19876	107 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	TNFSF8	P32971	234 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	ATP5G3	P48201	142 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	CCL18	P55774	89 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	RAB11A	P62491	216 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	DLK1	P80370	383 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	HIST1H1A	Q02539	215 aa	Predicted RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	AKR1C1	Q04828	323 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	PPP1R1A	Q13522	171 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	ESRG	Q1W209	222 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	SPANXN5	Q5MJ07	72 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	SAMD13	Q5VXD3	122 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	PATE2	Q6UY27	113 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	GPR141	Q7Z602	305 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	LRTM2	Q8N967	370 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	ZNF738	Q8NE65	137 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	BPIFC	Q8NFQ6	507 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	OR8A1	Q8NGG7	326 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	RNASE8	Q8TDE3	154 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	TMEM147	Q9BVK8	224 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	SLIRP	Q9GZT3	109 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583		Q9H8V8	135 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	NOP10	Q9NPE3	64 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	SCP2D1	Q9UJQ7	156 aa		4.05	□□□□□ -1.76
GYPB-205	ENST00000505583	TRAV26-1	A0A087WT03	109 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	KRTAP4-8	A0A0G2JLE6	195 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583		A0A0J9YY99	117 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	DUXB	A0A1W2PPF3	345 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583		H3BTX0	84 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	ADAP1	O75689	374 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	CFD	P00746	253 aa	Predicted RBP	4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	IL5	P05113	134 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	SLC25A6	P12236	298 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	ANXA3	P12429	323 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	TAS2R60	P59551	318 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	POLR2G	P62487	172 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	RHOB	P62745	196 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	SRPX	P78539	464 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	OR5I1	Q13606	314 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	PSG3	Q16557	428 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	TMEM128	Q5BJH2	165 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	MORN5	Q5VZ52	161 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	CYP2G1P	Q6ZSU1	146 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	TMEM144	Q7Z5S9	345 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	LINC00612	Q8N6U2	182 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	C16orf74	Q96GX8	76 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	SCGB3A2	Q96PL1	93 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	CCDC59	Q9P031	241 aa	Known RBP	4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	RABL2B	Q9UNT1	228 aa		4.04	□□□□□ -1.76
GYPB-205	ENST00000505583	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.04	□□□□□ -1.76
GYPB-205	ENST00000505583		A0A087X0K7	114 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	LINC00854	A0A1B0GVQ3	168 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	GAGE12B	A1L429	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	SMCO3	A2RU48	225 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	FABP12	A6NFH5	140 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	PRSS47	A8MTI9	375 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	ZNF701	M0R085	212 aa	Predicted RBP	4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	SLC17A3	O00476	420 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	HYPM	O75409	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	MED6	O75586	246 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	GAGE7	O76087	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	SFT2D2	O95562	160 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	OR5G3	P0C626	314 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	LINC00869	P0C866	280 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	GAGE12F	P0CL80	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	GAGE12G	P0CL81	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	GAGE12I	P0CL82	117 aa		4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	RPL7	P18124	248 aa	Known RBP	4.03	□□□□□ -1.76
GYPB-205	ENST00000505583	PLP1	P60201	277 aa		4.03	□□□□□ -1.76

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