RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-213ENST00000505074 A8MTW9 85 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 BOLA2-SMG1P6H3BVE0 249 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 PRM2P04554 102 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 DLK1P80370 383 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 SLC38A11Q08AI6 406 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
PDLIM7-213ENST00000505074 HTN1P15515 57 aa11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 TEPPQ6URK8 271 aa11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 LINC01587Q99440 93 aa11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 RBM38Q9H0Z9 239 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-213ENST00000505074 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 GOSR2O14653 212 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 CRXO43186 299 aaPredicted RBP11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 B2MP61769 119 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
PDLIM7-213ENST00000505074 F5H768 121 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 CXCL3P19876 107 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 PLP1P60201 277 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 PSG3Q16557 428 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 ZNF546Q86UE3 836 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 ZBTB8BQ8NAP8 495 aaPredicted RBP11.29□□□□□ -0.6
PDLIM7-213ENST00000505074 A0A087X0K7 114 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 EPM2AB3EWF7 344 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 FNDC10F2Z333 226 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 L7N2F9 121 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 COX7A2P2O60397 106 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 TSC22D2O75157 780 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 VAMP2P63027 116 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 ZNF846Q147U1 533 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 FCN2Q15485 313 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
PDLIM7-213ENST00000505074 FAM25EA8MYX2 175 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 CCSO14618 274 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 AGPAT2O15120 278 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 NUDT3O95989 172 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 AZU1P20160 251 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 TSPOP30536 169 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 BTCP35070 178 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 BCAP31P51572 246 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 TAS2R30P59541 319 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 TMEM256Q8N2U0 113 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-213ENST00000505074 H3BTX0 84 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 IL7P13232 177 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 BPIFA4PQ86YQ2 179 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 MITD1Q8WV92 249 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
PDLIM7-213ENST00000505074 C7orf66A4D0T2 115 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 K7EPK0 472 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 ATP5G1P05496 136 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 CXCL2P19875 107 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 CDKN1BP46527 198 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 ATP5G3P48201 142 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 TAS2R60P59551 318 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 SDHCQ99643 169 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 SLC50A1Q9BRV3 221 aa11.25□□□□□ -0.61
PDLIM7-213ENST00000505074 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 CAV2P51636 162 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 RAB31Q13636 194 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 CNPY1Q3B7I2 92 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 MGST2Q99735 147 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 GGACTQ9BVM4 153 aa11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 ZNF331Q9NQX6 463 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-213ENST00000505074 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 TRAV6A0A075B6T7 132 aa11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 J3KRW8 73 aa11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 CAMLGP49069 296 aa11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 PARD6GQ9BYG4 376 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-213ENST00000505074 PLAC8L1A1L4L8 177 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms