RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 AKR1C4P17516 323 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 CCR6P51684 374 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 CNN1P51911 297 aaKnown RBP4.09□□□□□ -1.75
GYPB-204ENST00000504951 SSBP1Q04837 148 aaKnown RBP4.09□□□□□ -1.75
GYPB-204ENST00000504951 SPCS2Q15005 226 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 EBLN2Q6P2I7 272 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 NOXA1Q86UR1 476 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 CLVS1Q8IUQ0 354 aaPredicted RBP4.09□□□□□ -1.75
GYPB-204ENST00000504951 BAP18Q8IXM2 172 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 TMEM256Q8N2U0 113 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 THAP8Q8NA92 274 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 OR11H7Q8NGC8 314 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 AP3S1Q92572 193 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 PPP1R14BQ96C90 147 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 SLC35E1Q96K37 410 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 TRGV9Q99603 122 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 SLC25A39Q9BZJ4 359 aaPredicted RBP4.09□□□□□ -1.75
GYPB-204ENST00000504951 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 RPRMQ9NS64 109 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 AP5S1Q9NUS5 200 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 DOK5Q9P104 306 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 SHPKQ9UHJ6 478 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 TIMM8BQ9Y5J9 83 aaPredicted RBP4.09□□□□□ -1.75
GYPB-204ENST00000504951 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
GYPB-204ENST00000504951 SIVA1O15304 175 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 ADAP1O75689 374 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 MEOX2P50222 304 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 TAS2R60P59551 318 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 Q6ZSA8 131 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 GPR141Q7Z602 305 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 OR1S1Q8NH92 325 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 C15orf40Q8WUR7 153 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 GNPNAT1Q96EK6 184 aaPredicted RBP4.08□□□□□ -1.76
GYPB-204ENST00000504951 PRRT1Q99946 306 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 TMEM208Q9BTX3 173 aa4.08□□□□□ -1.76
GYPB-204ENST00000504951 TRAV9-2A0A087WT02 112 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 ZNF701M0R085 212 aaPredicted RBP4.07□□□□□ -1.76
GYPB-204ENST00000504951 CTDSPLO15194 276 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 DUSP14O95147 198 aaKnown RBP4.07□□□□□ -1.76
GYPB-204ENST00000504951 ORM2P19652 201 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 GALR1P47211 349 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
GYPB-204ENST00000504951 DLK1P80370 383 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 MRPS10P82664 201 aaKnown RBP4.07□□□□□ -1.76
GYPB-204ENST00000504951 IL18Q14116 193 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 C16orf74Q96GX8 76 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 DIRAS2Q96HU8 199 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 C8orf49Q96NF6 230 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 UHRF2Q96PU4 802 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 SOSTQ9BQB4 213 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 MCUBQ9NWR8 336 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 PAIP2BQ9ULR5 123 aaKnown RBP4.07□□□□□ -1.76
GYPB-204ENST00000504951 KCNIP3Q9Y2W7 256 aa4.07□□□□□ -1.76
GYPB-204ENST00000504951 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 H3BP45 60 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 H3BRN7 92 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 BOLA2-SMG1P6H3BVE0 249 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 WRBO00258 174 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 CCNKO75909 580 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 INSP01308 110 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 FABP1P07148 127 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 SNRPCP09234 159 aaKnown RBP4.06□□□□□ -1.76
GYPB-204ENST00000504951 HTN1P15515 57 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
GYPB-204ENST00000504951 ATP5IP56385 69 aaPredicted RBP4.06□□□□□ -1.76
GYPB-204ENST00000504951 FGL1Q08830 312 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 C4orf46Q504U0 113 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 GGNBP1Q5YKI7 109 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 ACOT7LQ6ZUV0 252 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 TMED4Q7Z7H5 227 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 OR4D5Q8NGN0 318 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 OR1B1Q8NGR6 318 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 DYNC2LI1Q8TCX1 351 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 RNASE8Q8TDE3 154 aaKnown RBP4.06□□□□□ -1.76
GYPB-204ENST00000504951 LINC01587Q99440 93 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 C20orf144Q9BQM9 153 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 SHANK2-AS3Q9BTD1 123 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 PARD6GQ9BYG4 376 aaPredicted RBP4.06□□□□□ -1.76
GYPB-204ENST00000504951 CACFD1Q9UGQ2 172 aa4.06□□□□□ -1.76
GYPB-204ENST00000504951 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 PRAC2D3DTV9 90 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
GYPB-204ENST00000504951 SYNGR2O43760 224 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 HOXB5P09067 269 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 CXCL3P19876 107 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 VAMP1P23763 118 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 TNFSF8P32971 234 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 RAB11AP62491 216 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 HIST1H1AQ02539 215 aaPredicted RBP4.05□□□□□ -1.76
GYPB-204ENST00000504951 AKR1C1Q04828 323 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 PPP1R1AQ13522 171 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 TDRG1Q3Y452 100 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 SPANXN5Q5MJ07 72 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 PATE2Q6UY27 113 aa4.05□□□□□ -1.76
GYPB-204ENST00000504951 TMEM144Q7Z5S9 345 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms