RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SPATA31B1PQ5VZV4 182 aa9.28□□□□□ -0.92
DDX41-204ENST00000504807 C7orf50Q9BRJ6 194 aaKnown RBP9.28□□□□□ -0.92
DDX41-204ENST00000504807 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
DDX41-204ENST00000504807 PARD6GQ9BYG4 376 aaPredicted RBP9.28□□□□□ -0.92
DDX41-204ENST00000504807 ARL6Q9H0F7 186 aa9.28□□□□□ -0.92
DDX41-204ENST00000504807 GOLT1BQ9Y3E0 138 aa9.28□□□□□ -0.92
DDX41-204ENST00000504807 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
DDX41-204ENST00000504807 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 AGPAT2O15120 278 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 HBE1P02100 147 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 TCRBP04435 133 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 HTN3P15516 51 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 TAS2R30P59541 319 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 IL15RAQ13261 267 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 GPR82Q96P67 336 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 NDUFAF3Q9BU61 184 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 ARV1Q9H2C2 271 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 NPVFQ9HCQ7 196 aa9.27□□□□□ -0.93
DDX41-204ENST00000504807 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 FAM24AA6NFZ4 105 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 FNDC10F2Z333 226 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 RAP2BP61225 183 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
DDX41-204ENST00000504807 OPCMLQ14982 345 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 TEPPQ6URK8 271 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 OR10P1Q8NGE3 313 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 NUDT15Q9NV35 164 aa9.26□□□□□ -0.93
DDX41-204ENST00000504807 LSM5Q9Y4Y9 91 aaKnown RBP9.26□□□□□ -0.93
DDX41-204ENST00000504807 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 IGSF23A1L1A6 192 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 CENPXA8MT69 81 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 H3BQ15 152 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 BOLA2-SMG1P6H3BVE0 249 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 CST7O76096 145 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 RPL7P18124 248 aaKnown RBP9.25□□□□□ -0.93
DDX41-204ENST00000504807 SELENOTP62341 195 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 PSG3Q16557 428 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 SAMD13Q5VXD3 122 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 TMEM88Q6PEY1 159 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 LINC00305Q7Z4B0 112 aa9.25□□□□□ -0.93
DDX41-204ENST00000504807 ZNF431Q8TF32 576 aaPredicted RBP9.25□□□□□ -0.93
DDX41-204ENST00000504807 ZNF331Q9NQX6 463 aaPredicted RBP9.25□□□□□ -0.93
DDX41-204ENST00000504807 FAM25EA8MYX2 175 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
DDX41-204ENST00000504807 INSP01308 110 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 OXA1LQ15070 435 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 MIC13Q5XKP0 118 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 Q6ZR54 194 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 MGAT4CQ9UBM8 478 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
DDX41-204ENST00000504807 P0DMU3 169 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 FAM231AP0DMU4 169 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 FAM231CP0DMU5 169 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 NRARPQ7Z6K4 114 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 ZNF546Q86UE3 836 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 RPUSD4Q96CM3 377 aaKnown RBP9.23□□□□□ -0.93
DDX41-204ENST00000504807 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
DDX41-204ENST00000504807 TMEM208Q9BTX3 173 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 WDR83OSQ9Y284 106 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
DDX41-204ENST00000504807 GOSR2O14653 212 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 DEFB130BP0DP73 79 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 DEFB130AP0DP74 79 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 DAD1P61803 113 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 IFITM3Q01628 133 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 RAB32Q13637 225 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 C12orf45Q8N5I9 185 aaPredicted RBP9.22□□□□□ -0.93
DDX41-204ENST00000504807 GGACTQ9BVM4 153 aa9.22□□□□□ -0.93
DDX41-204ENST00000504807 C5orf51A6NDU8 294 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 BCAP31P51572 246 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 CAV2P51636 162 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 RHOBP62745 196 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 GCSAMLQ5JQS6 135 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 TMEM252Q8N6L7 170 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 C2orf50Q96LR7 162 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 ZNF586Q9NXT0 402 aa9.21□□□□□ -0.94
DDX41-204ENST00000504807 UBE2L5PA0A1B0GUS4 154 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 TEX48A0A1B0GUV7 120 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 L7N2F9 121 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 SIX6O95475 246 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 TSPOP30536 169 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 CAMLGP49069 296 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 S100A10P60903 97 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 VAMP2P63027 116 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 C10orf113Q5VZT2 155 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
DDX41-204ENST00000504807 FAM210BQ96KR6 192 aa9.2□□□□□ -0.94
DDX41-204ENST00000504807 LINC01587Q99440 93 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms