RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RHOBP62745 196 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 OPCMLQ14982 345 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 Q6ZTC4 211 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 DNAJC4Q9NNZ3 241 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 PPP1R14DQ9NXH3 145 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 GOLT1BQ9Y3E0 138 aa10.28□□□□□ -0.76
HOXC9-202ENST00000504557 CXCL3P19876 107 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 CLINT1Q14677 625 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 BPIFA4PQ86YQ2 179 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 C2CD4CQ8TF44 421 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 MARVELD1Q9BSK0 173 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 NMES1Q9C002 83 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
HOXC9-202ENST00000504557 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 A0A087X0K7 114 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 E5RGE8 158 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 DUSP14O95147 198 aaKnown RBP10.26□□□□□ -0.77
HOXC9-202ENST00000504557 H2BFSP57053 126 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 PSG3Q16557 428 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
HOXC9-202ENST00000504557 BAP18Q8IXM2 172 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 OR11H7Q8NGC8 314 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 OR5C1Q8NGR4 320 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 OR1L4Q8NGR5 311 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 SLC25A31Q9H0C2 315 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 RNF24Q9Y225 148 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
HOXC9-202ENST00000504557 PLECQ15149 4684 aaKnown RBP10.25□□□□□ -0.77
HOXC9-202ENST00000504557 ZNF705FA8MVS1 300 aaPredicted RBP10.25□□□□□ -0.77
HOXC9-202ENST00000504557 H0YIZ8 118 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 SLC17A3O00476 420 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 MRPS12O15235 138 aaKnown RBP10.25□□□□□ -0.77
HOXC9-202ENST00000504557 HBE1P02100 147 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRM2P04554 102 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRR20EP86478 221 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRR20CP86479 221 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRR20DP86480 221 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRR20BP86481 221 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PRR20AP86496 221 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 CYCSP99999 105 aaKnown RBP10.25□□□□□ -0.77
HOXC9-202ENST00000504557 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 LCN15Q6UWW0 184 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 OR8A1Q8NGG7 326 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PPP1R1CQ8WVI7 109 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
HOXC9-202ENST00000504557 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 PFDN5Q99471 154 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 HRH4Q9H3N8 390 aa10.25□□□□□ -0.77
HOXC9-202ENST00000504557 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 H3BQ15 152 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 INSP01308 110 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 RPL29P47914 159 aaKnown RBP10.24□□□□□ -0.77
HOXC9-202ENST00000504557 C12orf74Q32Q52 190 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 SLC50A1Q9BRV3 221 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
HOXC9-202ENST00000504557 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 RFNGQ9Y644 331 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 DNAH1Q9P2D7 4330 aa10.24□□□□□ -0.77
HOXC9-202ENST00000504557 LOC102723971A0A1B0GUV8 181 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 ZNF705GA8MUZ8 300 aaPredicted RBP10.23□□□□□ -0.77
HOXC9-202ENST00000504557 BOLA2-SMG1P6H3BVE0 249 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 HTN1P15515 57 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 HTN3P15516 51 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 IGF2BP2-AS1Q96M15 143 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 NEU1Q99519 415 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 PARD6GQ9BYG4 376 aaPredicted RBP10.23□□□□□ -0.77
HOXC9-202ENST00000504557 SMIM3Q9BZL3 60 aa10.23□□□□□ -0.77
HOXC9-202ENST00000504557 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 PRAC2D3DTV9 90 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 J3KRW8 73 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 SPART-AS1P0CW21 52 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 ALG5Q9Y673 324 aa10.22□□□□□ -0.77
HOXC9-202ENST00000504557 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 A8MTW9 85 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 CRXO43186 299 aaPredicted RBP10.21□□□□□ -0.77
HOXC9-202ENST00000504557 MPDU1O75352 247 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 MPC2O95563 127 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 AMBPP02760 352 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 PET100P0DJ07 73 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 IGLC2P0DOY2 106 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 PYYP10082 97 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 CXCL2P19875 107 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
HOXC9-202ENST00000504557 OR10J6PQ8NGY7 276 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
HOXC9-202ENST00000504557 MBD2Q9UBB5 411 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms