RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MIR17HGQ75NE6 70 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 SH3BGRL3Q9H299 93 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 HRH4Q9H3N8 390 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 FUT9Q9Y231 359 aa8.82□□□□□ -1
PDLIM5-208ENST00000504489 KANTRA0A1W2PQU2 76 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 MBP02144 154 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 GUK1Q16774 197 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 PSMG4Q5JS54 123 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 SPATA31B1PQ5VZV4 182 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 LCN15Q6UWW0 184 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 C16orf92Q96LL3 132 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 SLC25A2Q9BXI2 301 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 COL7A1Q02388 2944 aa8.81□□□□□ -1
PDLIM5-208ENST00000504489 H3BQ15 152 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 PFDN1O60925 122 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 HIST1H1EP10412 219 aaKnown RBP8.8□□□□□ -1
PDLIM5-208ENST00000504489 SPP1P10451 314 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 RAB2AP61019 212 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 ZNF124Q15973 351 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 OR10G4Q8NGN3 311 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 OR10G9Q8NGN4 311 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 OR10G7Q8NGN6 311 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 SAT2Q96F10 170 aaPredicted RBP8.8□□□□□ -1
PDLIM5-208ENST00000504489 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
PDLIM5-208ENST00000504489 LOC102724200A0A096LPH7 203 aaPredicted RBP8.79□□□□□ -1
PDLIM5-208ENST00000504489 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 SCO2A0A1W2PP80 73 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 A0A1W2PPV4 95 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 ZNF253O75346 499 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 TAS2R45P59539 299 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 EIF5AP63241 154 aaKnown RBP8.79□□□□□ -1
PDLIM5-208ENST00000504489 ZFP69Q49AA0 526 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 TMEM41BQ5BJD5 291 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 FAM122CQ6P4D5 195 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 RPP25LQ8N5L8 163 aaKnown RBP8.79□□□□□ -1
PDLIM5-208ENST00000504489 LRRC20Q8TCA0 184 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 C20orf173Q96LM9 149 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 LINC00052Q96N35 136 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 PAXXQ9BUH6 204 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
PDLIM5-208ENST00000504489 OR51M1Q9H341 326 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 ZNF331Q9NQX6 463 aaPredicted RBP8.79□□□□□ -1
PDLIM5-208ENST00000504489 RPRMQ9NS64 109 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 ZNF586Q9NXT0 402 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 CLEC5AQ9NY25 188 aa8.79□□□□□ -1
PDLIM5-208ENST00000504489 TGP01266 2768 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 TRBV19A0A075B6N1 114 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 KIR2DL5BA0A0G2JN68 375 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 KIR2DL5BA0A0G2JPC4 375 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 SEC11BP0C7V7 166 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 NHLRC4P0CG21 123 aaPredicted RBP8.78□□□□□ -1
PDLIM5-208ENST00000504489 PYYP10082 97 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 CDC34P49427 236 aaPredicted RBP8.78□□□□□ -1
PDLIM5-208ENST00000504489 PDE6HQ13956 83 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 HAGHQ16775 308 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 KHDC3LQ587J8 217 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 PQLC2Q6ZP29 291 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 STHQ8IWL8 128 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 KIR2DL5AQ8N109 375 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 KIR2DL5BQ8NHK3 375 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 STOML3Q8TAV4 291 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 FXYD5Q96DB9 178 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 ZNF503Q96F45 646 aa8.78□□□□□ -1
PDLIM5-208ENST00000504489 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
PDLIM5-208ENST00000504489 KNCNA6PVL3 124 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 OR7C2O60412 319 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 SNRPCP09234 159 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 HLA-DRB4P13762 266 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 APOC4P55056 127 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 PSG3Q16557 428 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 ACTL10Q5JWF8 245 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 AKR1C8PQ5T2L2 129 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 IGFL4Q6B9Z1 124 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 FOXI2Q6ZQN5 318 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 TRPT1Q86TN4 253 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 BAP18Q8IXM2 172 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 C9orf62Q8N4C0 152 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 RNF141Q8WVD5 230 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 RAB24Q969Q5 203 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 ASCL2Q99929 193 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 ACTR3CQ9C0K3 210 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 HLA-DRB4X5D2U9 266 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1.01
PDLIM5-208ENST00000504489 H3BMM0 161 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 H3BTX0 84 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 SLC17A3O00476 420 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 UBE2CO00762 179 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 NDUFB4O95168 129 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 OR10J4P0C629 311 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 STAG3L2P0CL84 134 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 STAG3L3P0CL85 134 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 C4BPBP20851 252 aa8.76□□□□□ -1.01
PDLIM5-208ENST00000504489 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms