RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 AGFG2O95081 481 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM223AQ8IWN6 122 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 NCOA6Q14686 2063 aaPredicted RBP4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM236AA0A1B0GUQ0 79 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM236BA0A1B0GV22 79 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 COX7CP15954 63 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 CSRP1P21291 193 aaKnown RBP4.95□□□□□ -1.62
LINC02397-201ENST00000504409 TNRC6BQ9UPQ9 1833 aaKnown RBP4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 CELA3AP09093 270 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 GLRXP35754 106 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 PRR13Q9NZ81 148 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 CELA2AP08217 269 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 DSCR8Q96T75 97 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 IGLV3-12A0A075B6K2 115 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 SP5Q6BEB4 398 aaPredicted RBP4.95□□□□□ -1.62
LINC02397-201ENST00000504409 Q6ZT83 130 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 C21orf62Q9NYP8 219 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 SHANK2-AS3Q9BTD1 123 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 COL4A4P53420 1690 aaPredicted RBP4.95□□□□□ -1.62
LINC02397-201ENST00000504409 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 CCL3P10147 92 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 CCL11P51671 97 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 LINC01620Q4KN68 170 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 GNG5P63218 68 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 ZFP36L1Q07352 338 aaKnown RBP4.94□□□□□ -1.62
LINC02397-201ENST00000504409 UFSP1Q6NVU6 142 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 FOXQ1Q9C009 403 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 SNRNP200O75643 2136 aaKnown RBP4.94□□□□□ -1.62
LINC02397-201ENST00000504409 NPIPB3Q92617 1050 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 IGLV3-1P01715 115 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 TMEM200BQ69YZ2 307 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 I3L3M4 83 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 CCL4L1Q8NHW4 92 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 A0A0J9YX75 114 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 COL8A2P25067 703 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 PRSS12P56730 875 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 HIST1H4AP62805 103 aaKnown RBP4.94□□□□□ -1.62
LINC02397-201ENST00000504409 TMEM196Q5HYL7 178 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 ST6GALNAC6Q969X2 333 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 LSM4Q9Y4Z0 139 aaKnown RBP4.94□□□□□ -1.62
LINC02397-201ENST00000504409 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 TMEM256-PLSCR3K7ERE1 68 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 MINOS1Q5TGZ0 78 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 MINOS1-NBL1R4GNA1 71 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 IGHV1OR21-1A0A087WYE8 117 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 A0A0A6YYD4 124 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 A4D1N5 150 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 FOXC1Q12948 553 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 LINC00311Q8N616 119 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 RNF114Q9Y508 228 aa4.94□□□□□ -1.62
LINC02397-201ENST00000504409 FAM214BQ7L5A3 538 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 C18orf15Q96N68 181 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 FAM222AQ5U5X8 452 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 USMG5Q96IX5 58 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 DEFB118Q96PH6 123 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 AMELYQ99218 206 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 FAM60AQ9NP50 221 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 EML6Q6ZMW3 1958 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 COX6A1P12074 109 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 CD59P13987 128 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
LINC02397-201ENST00000504409 RBM3P98179 157 aaKnown RBP4.93□□□□□ -1.62
LINC02397-201ENST00000504409 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 BEX4Q9NWD9 120 aaPredicted RBP4.93□□□□□ -1.62
LINC02397-201ENST00000504409 CD28P10747 220 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 ZAR1Q86SH2 424 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 PRSS29PA6NIE9 313 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 FOXS1O43638 330 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 IGKV1-5P01602 117 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 LILRA6Q6PI73 481 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 GATA4P43694 442 aa4.93□□□□□ -1.62
LINC02397-201ENST00000504409 J3QQQ9 107 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 CTSBP07858 339 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 KIAA2026Q5HYC2 2103 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 SMIM9A6NGZ8 99 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 DEFB133Q30KQ1 61 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 C9orf47Q6ZRZ4 202 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 USF3Q68DE3 2245 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 WIPF1O43516 503 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 IGLV3-19P01714 112 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 HES7Q9BYE0 225 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 GTF3C1Q12789 2109 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 PRRC2BQ5JSZ5 2229 aaKnown RBP4.92□□□□□ -1.62
LINC02397-201ENST00000504409 H3BUA1 57 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 M0R1B8 84 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 NBR2O15453 112 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 IGKV1-9A0A0C4DH69 117 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 TCF15Q12870 199 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 DEFB132Q7Z7B7 95 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 IGF2BP2-AS1Q96M15 143 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 A0A1B0GW54 56 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 B9A039 149 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 CFHR2P36980 270 aa4.92□□□□□ -1.62
LINC02397-201ENST00000504409 MP68P56378 58 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms