RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PSMB3P49720 205 aa10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 RPL7L1Q6DKI1 246 aaKnown RBP10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 SMIM3Q9BZL3 60 aa10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 ARV1Q9H2C2 271 aa10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
PDLIM7-211ENST00000504318 ZNF705FA8MVS1 300 aaPredicted RBP10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 CST7O76096 145 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 ZNF705DP0CH99 300 aaPredicted RBP10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 ZNF705BP0CI00 300 aaPredicted RBP10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PLP1P60201 277 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PRR20EP86478 221 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PRR20CP86479 221 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PRR20DP86480 221 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PRR20BP86481 221 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 PRR20AP86496 221 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 NHLH2Q02577 135 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 RPP25LQ8N5L8 163 aaKnown RBP10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 OR5C1Q8NGR4 320 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 ATP5SQ99766 215 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 MED9Q9NWA0 146 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 APLNQ9ULZ1 77 aa10.06□□□□□ -0.8
PDLIM7-211ENST00000504318 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 F6UB75 175 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 H3BRN7 92 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 ISLRO14498 428 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 IFNA5P01569 189 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 FABP1P07148 127 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 NMBP08949 121 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 S100A1P23297 94 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 ARL16Q0P5N6 197 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 ATP6V1FQ16864 119 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 Q6ZTC4 211 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 TMED6Q8WW62 240 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 GNPNAT1Q96EK6 184 aaPredicted RBP10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 NEU1Q99519 415 aa10.05□□□□□ -0.8
PDLIM7-211ENST00000504318 A0A0J9YX75 114 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 FNDC10F2Z333 226 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 METTL15P1P0C7V9 234 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 HLA-DMBP28068 263 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 RAB5CP51148 216 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 DLK1P80370 383 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 CLINT1Q14677 625 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 SLC7A5P1Q8MH63 180 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 OR8I2Q8N0Y5 310 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 PFDN2Q9UHV9 154 aa10.04□□□□□ -0.8
PDLIM7-211ENST00000504318 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 C11orf94C9JXX5 98 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 AKR1C1Q04828 323 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 SLC38A11Q08AI6 406 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 C1orf158Q8N1D5 194 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 OR10P1Q8NGE3 313 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 SCGB1C1Q8TD33 95 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 C2CD4CQ8TF44 421 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 C1QTNF4Q9BXJ3 329 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 SLC25A39Q9BZJ4 359 aaPredicted RBP10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 SLC35B3Q9H1N7 401 aa10.03□□□□□ -0.8
PDLIM7-211ENST00000504318 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 ORM2P19652 201 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 ID1P41134 155 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 SULT1A2P50226 295 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 FXYD7P58549 80 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 BLOC1S1P78537 153 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 COMMD7Q86VX2 200 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 LINC00052Q96N35 136 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 RSG1Q9BU20 258 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 TMEM147Q9BVK8 224 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 GGACTQ9BVM4 153 aa10.02□□□□□ -0.81
PDLIM7-211ENST00000504318 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 MEOX2P50222 304 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 TCTAP57738 103 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 FAM78BQ5VT40 261 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 SPATA31B1PQ5VZV4 182 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 IGFL4Q6B9Z1 124 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 OR1B1Q8NGR6 318 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 SLC25A22Q9H936 323 aa10.01□□□□□ -0.81
PDLIM7-211ENST00000504318 A0A087X0K7 114 aa10□□□□□ -0.81
PDLIM7-211ENST00000504318 CRXO43186 299 aaPredicted RBP10□□□□□ -0.81
PDLIM7-211ENST00000504318 LINC00869P0C866 280 aa10□□□□□ -0.81
PDLIM7-211ENST00000504318 GALR1P47211 349 aa10□□□□□ -0.81
PDLIM7-211ENST00000504318 PSG9Q00887 426 aa10□□□□□ -0.81
PDLIM7-211ENST00000504318 SAMD13Q5VXD3 122 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms