RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CFHR2P36980 270 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 SRSF4Q08170 494 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE13Q4V321 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 A0A0G2JRQ6 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE12JA6NER3 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 APOC4P55056 127 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE1Q13065 139 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE4Q13068 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE5Q13069 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 AZU1P20160 251 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 RPP25LQ8N5L8 163 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H2BLQ99880 126 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GFRA4Q9GZZ7 299 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 IGHV3-16A0A0C4DH30 117 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 hDV102S1A0JD36 115 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 NDUFB8O95169 186 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST3H2BBQ8N257 126 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 TET1Q8NFU7 2136 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 SPXQ9BT56 116 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 LY6G6EA0A0G2JKS1 128 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 GUSBP1Q15486 140 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 MCRIP2Q9BUT9 160 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 U3KQA8 63 aa5.79□□□□□ -1.48
SYNPO2-205ENST00000504178 F5P12259 2224 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 SSBP2P81877 361 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 SPINK13Q1W4C9 94 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 PCP4P48539 62 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 IGFL3Q6UXB1 125 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 ANAPC13Q9BS18 74 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 NDUFAF3Q9BU61 184 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 KNCNA6PVL3 124 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNF561-AS1K7EIQ3 104 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 PDE6HQ13956 83 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNF562Q6V9R5 426 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 TCF20Q9UGU0 1960 aaKnown RBP5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 TRBV25-1A0A075B6N4 114 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 VWC2LB2RUY7 222 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 FAM120AOSQ5T036 256 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 BCL6BQ8N143 479 aaPredicted RBP5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 HS3ST6Q96QI5 342 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 LIME1Q9H400 295 aa5.78□□□□□ -1.48
SYNPO2-205ENST00000504178 DOCK6Q96HP0 2047 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 ARMS2P0C7Q2 107 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 LY6G5BQ8NDX9 201 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 KLF12Q9Y4X4 402 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 FRMPD3Q5JV73 1810 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 G3V318 75 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 PAX9P55771 341 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 C17orf58Q2M2W7 97 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 DUX4L9Q6RFH8 374 aaPredicted RBP5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 TSC2P49815 1807 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 EP400Q96L91 3159 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 TNFRSF6BO95407 300 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 MST1LQ2TV78 715 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 PRIMA1Q86XR5 153 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 LYL1P12980 280 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 I3L3M4 83 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 EREGO14944 169 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 ESDP10768 282 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 YPEL3P61236 119 aaPredicted RBP5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 C2orf82Q6UX34 121 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 NDUFA4L2Q9NRX3 87 aa5.77□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM14BQ9NUH8 114 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE12BA1L429 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE7O76087 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 PFN1P07737 140 aaKnown RBP5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE12FP0CL80 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE12GP0CL81 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 GAGE12IP0CL82 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 PLA2G2CQ5R387 149 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 THAP8Q8NA92 274 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 TP53TG1Q9Y2A0 90 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 TRAV8-3A0A0A6YYJ7 113 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 NDUFA4O00483 81 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM141Q96I45 108 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 VWA8A3KMH1 1905 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 COLCA2A8K830 154 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 SYS1-DBNDD2H3BUS1 97 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 CGB3P0DN86 165 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 HAPLN4Q86UW8 402 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 NKAPP1Q8N9T2 125 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 MRPL27Q9P0M9 148 aaKnown RBP5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 TMEM213A2RRL7 107 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 TEX36Q5VZQ5 186 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 Q6ZR03 302 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 ZNF492Q9P255 531 aa5.76□□□□□ -1.49
SYNPO2-205ENST00000504178 PRSS46E5RG02 174 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 RHODO00212 210 aa5.75□□□□□ -1.49
SYNPO2-205ENST00000504178 HOXB4P17483 251 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms