RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 DCANP1Q8TF63 244 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 SLC25A2Q9BXI2 301 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 SMAD5-AS1Q9Y6J3 95 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 KIAA1109Q2LD37 5005 aa7.48□□□□□ -1.21
NUP54-203ENST00000504173 A0A087X0K7 114 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
NUP54-203ENST00000504173 OR7C2O60412 319 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 EIF3GO75821 320 aaKnown RBP eCLIP7.47□□□□□ -1.21
NUP54-203ENST00000504173 SNRPCP09234 159 aaKnown RBP7.47□□□□□ -1.21
NUP54-203ENST00000504173 SEC11BP0C7V7 166 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 ZNF688P0C7X2 276 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 ID1P41134 155 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 CDC34P49427 236 aaPredicted RBP7.47□□□□□ -1.21
NUP54-203ENST00000504173 CMC4P56277 68 aaPredicted RBP7.47□□□□□ -1.21
NUP54-203ENST00000504173 KHDC3LQ587J8 217 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 SAMD13Q5VXD3 122 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 SLC51BQ86UW2 128 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 Q8N1Y9 231 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 FAM24BQ8N5W8 94 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 C16orf92Q96LL3 132 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 TMEM14CQ9P0S9 112 aa7.47□□□□□ -1.21
NUP54-203ENST00000504173 FRAS1Q86XX4 4008 aa7.46□□□□□ -1.21
NUP54-203ENST00000504173 H3BTX0 84 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 SOCS3O14543 225 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 HMGB3O15347 200 aaKnown RBP7.46□□□□□ -1.22
NUP54-203ENST00000504173 IGLC2P0DOY2 106 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 PYYP10082 97 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 PSMB3P49720 205 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 DEFB131AP59861 70 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 SNRPD3P62318 126 aaKnown RBP7.46□□□□□ -1.22
NUP54-203ENST00000504173 ODF3L2Q3SX64 289 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.22
NUP54-203ENST00000504173 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 RPP25LQ8N5L8 163 aaKnown RBP7.46□□□□□ -1.22
NUP54-203ENST00000504173 LRRC20Q8TCA0 184 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 TMED6Q8WW62 240 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 FAM167A-AS1Q96KT0 104 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 C17orf77Q96MU5 243 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 LINC00052Q96N35 136 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 PAXXQ9BUH6 204 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 ACTR3CQ9C0K3 210 aaPredicted RBP7.46□□□□□ -1.22
NUP54-203ENST00000504173 WFDC10AQ9H1F0 79 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 OR51M1Q9H341 326 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 HRH4Q9H3N8 390 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 RPRMQ9NS64 109 aa7.46□□□□□ -1.22
NUP54-203ENST00000504173 UMAD1C9J7I0 102 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 H3BQ15 152 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 ISLRO14498 428 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 OR10J4P0C629 311 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 HIST1H1EP10412 219 aaKnown RBP7.45□□□□□ -1.22
NUP54-203ENST00000504173 UBE2L3P68036 154 aaKnown RBP7.45□□□□□ -1.22
NUP54-203ENST00000504173 GUK1Q16774 197 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 PQLC2Q6ZP29 291 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 DEFB125Q8N687 156 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 BLNKQ8WV28 456 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 TUBA4BQ9H853 241 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 C19orf73Q9NVV2 129 aa7.45□□□□□ -1.22
NUP54-203ENST00000504173 STARD9Q9P2P6 4700 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 CTXND1A0A1B0GTU2 59 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 SLC17A3O00476 420 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 NBEAP1P0C6P0 100 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 IGHV4-30-4P0DP06 118 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 IGFL4Q6B9Z1 124 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 RNF141Q8WVD5 230 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 FXYD5Q96DB9 178 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 ZNF586Q9NXT0 402 aa7.44□□□□□ -1.22
NUP54-203ENST00000504173 TRBV19A0A075B6N1 114 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF253O75346 499 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ARL14EPLP0DKL9 152 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 PDE6HQ13956 83 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF124Q15973 351 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 SSX7Q7RTT5 188 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 IQCF2Q8IXL9 164 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 RNF182Q8N6D2 247 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 FAM213BQ8TBF2 198 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 SAT2Q96F10 170 aaPredicted RBP7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF503Q96F45 646 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 C20orf173Q96LM9 149 aa7.43□□□□□ -1.22
NUP54-203ENST00000504173 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
NUP54-203ENST00000504173 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
NUP54-203ENST00000504173 KNCNA6PVL3 124 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms