RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 PRR20CP86479 221 aa13.09□□□□□ -0.31
RNF4-204ENST00000503659 PRR20DP86480 221 aa13.09□□□□□ -0.31
RNF4-204ENST00000503659 PRR20BP86481 221 aa13.09□□□□□ -0.31
RNF4-204ENST00000503659 PRR20AP86496 221 aa13.09□□□□□ -0.31
RNF4-204ENST00000503659 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
RNF4-204ENST00000503659 UBE2L5PA0A1B0GUS4 154 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 CRXO43186 299 aaPredicted RBP13.08□□□□□ -0.32
RNF4-204ENST00000503659 COX7A2P2O60397 106 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 DUSP14O95147 198 aaKnown RBP13.08□□□□□ -0.32
RNF4-204ENST00000503659 OPCMLQ14982 345 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 MIC13Q5XKP0 118 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 IGF2BP2-AS1Q96M15 143 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
RNF4-204ENST00000503659 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 RFNGQ9Y644 331 aa13.08□□□□□ -0.32
RNF4-204ENST00000503659 M0R2Z0 102 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 SIX6O95475 246 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
RNF4-204ENST00000503659 CXCL2P19875 107 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 S100A11P31949 105 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 EMP1P54849 157 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 PSG3Q16557 428 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 C10orf113Q5VZT2 155 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 STX12Q86Y82 276 aa13.07□□□□□ -0.32
RNF4-204ENST00000503659 DNAH10Q8IVF4 4471 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 IGHV4-4A0A075B6R2 117 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 TMEM189A5PLL7 270 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 SNRPCP09234 159 aaKnown RBP13.06□□□□□ -0.32
RNF4-204ENST00000503659 IGLC2P0DOY2 106 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 RAB31Q13636 194 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 LCN15Q6UWW0 184 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 OR8A1Q8NGG7 326 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
RNF4-204ENST00000503659 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
RNF4-204ENST00000503659 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 INMT-MINDY4F8WBC2 141 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 SLC17A3O00476 420 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 PRAF2O60831 178 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 HBE1P02100 147 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 AMBPP02760 352 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 HBG1P69891 147 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 HBG2P69892 147 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
RNF4-204ENST00000503659 BAXQ07812 192 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 Q6ZRG5 221 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 BPIFA4PQ86YQ2 179 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 LRRC20Q8TCA0 184 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 CHAC2Q8WUX2 184 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 MARVELD1Q9BSK0 173 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 DKK2Q9UBU2 259 aa13.05□□□□□ -0.32
RNF4-204ENST00000503659 TRAV5A0A0B4J249 113 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 H3BTX0 84 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 BOLA2-SMG1P6H3BVE0 249 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 INSP01308 110 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 FGF7P21781 194 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 RPL29P47914 159 aaKnown RBP13.04□□□□□ -0.32
RNF4-204ENST00000503659 B2MP61769 119 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
RNF4-204ENST00000503659 SLC50A1Q9BRV3 221 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 RNF126Q9BV68 326 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 NMES1Q9C002 83 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 OR5AC2Q9NZP5 309 aa13.04□□□□□ -0.32
RNF4-204ENST00000503659 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 H0YIZ8 118 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 H3BQ15 152 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 PRM2P04554 102 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 H2BFSP57053 126 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 NHLH2Q02577 135 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 ATP6V1FQ16864 119 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 RRN3P1Q2M238 152 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 SAT2Q96F10 170 aaPredicted RBP13.03□□□□□ -0.32
RNF4-204ENST00000503659 PFDN5Q99471 154 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
RNF4-204ENST00000503659 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
RNF4-204ENST00000503659 LRRC37A5PQ49AS3 106 aa13.02□□□□□ -0.33
RNF4-204ENST00000503659 TMEM208Q9BTX3 173 aa13.02□□□□□ -0.33
RNF4-204ENST00000503659 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
RNF4-204ENST00000503659 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 ZNF705GA8MUZ8 300 aaPredicted RBP13.01□□□□□ -0.33
RNF4-204ENST00000503659 PRAC2D3DTV9 90 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 E5RGE8 158 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 RHOBP62745 196 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 OR5C1Q8NGR4 320 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 NIPSNAP3BQ9BS92 247 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 NPCDR1Q9BY65 106 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
RNF4-204ENST00000503659 MPDU1O75352 247 aa13□□□□□ -0.33
RNF4-204ENST00000503659 DEFA1P59665 94 aa13□□□□□ -0.33
RNF4-204ENST00000503659 DEFA3P59666 94 aa13□□□□□ -0.33
RNF4-204ENST00000503659 THAP6Q8TBB0 222 aa13□□□□□ -0.33
RNF4-204ENST00000503659 ZNF586Q9NXT0 402 aa13□□□□□ -0.33
RNF4-204ENST00000503659 RLN2P04090 185 aa12.99□□□□□ -0.33
RNF4-204ENST00000503659 CYCSP99999 105 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms